BLASTX nr result

ID: Coptis23_contig00034781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034781
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]               65   8e-09
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...    65   8e-09
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
 Frame = +2

Query: 23  DQVEEEFESLPSWLKSLNNAPSSVLPWLPITCHELRASKLSSSFVDEKVDENSLMEVEGE 202
           ++V EEFE++P WLK        +LPWLPI+  EL +    + FV    D + L+   G+
Sbjct: 142 ERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDELNS---GTHFVCCGDDLDELVVDTGD 198

Query: 203 GKEMED----KSSSVYIENAPIDDEVQRKATCLKIEVVSFEST 319
           G+E  D    +   V  +NAP+D EVQ  A  LK ++++FES+
Sbjct: 199 GEERVDVVIEEIEIVQSKNAPLDAEVQNTAAGLKAQILTFESS 241


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
 Frame = +2

Query: 23  DQVEEEFESLPSWLKSLNNAPSSVLPWLPITCHELRASKLSSSFVDEKVDENSLMEVEGE 202
           ++V EEFE++P WLK        +LPWLPI+  EL +    + FV    D + L+   G+
Sbjct: 142 ERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDELNS---GTHFVCCGDDLDELVVDTGD 198

Query: 203 GKEMED----KSSSVYIENAPIDDEVQRKATCLKIEVVSFEST 319
           G+E  D    +   V  +NAP+D EVQ  A  LK ++++FES+
Sbjct: 199 GEERVDVVIEEIEIVQSKNAPLDAEVQNTAAGLKAQILTFESS 241


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
 Frame = +2

Query: 23  DQVEEEFESLPSWLK-SLNNAPSSVLPWLPITCHELRASKLSSSFVDEKVDENSLMEV-E 196
           ++V+EEF S+P +LK + ++A    LPWLP++   L + +L   F   +  E+ L +V E
Sbjct: 136 ERVDEEFGSIPDYLKDAASSANELFLPWLPLSHDTLNSREL---FAGYESPEDFLSQVGE 192

Query: 197 GEGKEMEDKSSSVYIEN---APIDDEVQRKATCLKIEVVSFEST 319
           G G   +D +  + I+    AP+D+E+Q  AT LK  +++FES+
Sbjct: 193 GSGDNSKDVAEEMEIDLVMVAPLDEEIQNMATSLKERIMTFESS 236


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
 Frame = +2

Query: 38  EFESLPSWLKSLNNAPSSVLPWLPITCHELRASKLSSSFVDEKVDENSLMEV-EGEGKEM 214
           EFESLP WLK   N    VLPWLP+   +L + +L   F   + + + L +V E  G  +
Sbjct: 149 EFESLPDWLKDTVNT-DLVLPWLPVALDDLNSREL---FGTHESEGDPLSQVGECAGDTL 204

Query: 215 EDKSSSVYIE---NAPIDDEVQRKATCLKIEVVSFES 316
           E+    + I+   NAP+  E+Q  A  L+I+VV FES
Sbjct: 205 EEVMEEMEIDSPPNAPLAPEIQDMAASLRIQVVIFES 241


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