BLASTX nr result

ID: Coptis23_contig00034780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034780
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244...   130   2e-28
emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]   130   2e-28
emb|CBI16193.3| unnamed protein product [Vitis vinifera]              107   3e-21
ref|XP_004148236.1| PREDICTED: uncharacterized protein LOC101217...   105   8e-21
ref|XP_002531117.1| conserved hypothetical protein [Ricinus comm...   102   8e-20

>ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244942 [Vitis vinifera]
          Length = 317

 Score =  130 bits (327), Expect = 2e-28
 Identities = 86/188 (45%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
 Frame = +1

Query: 4   VSSPDLPNMNMADSSNNRVLSTHTFIQECNCPTVVGIVSSGMSETDPASAVIDKLVKGKS 183
           V+SPDL N+ +ADSSN   ++   F+QE N     G+VSS  ++ D ASAVID LVKGK+
Sbjct: 132 VTSPDLSNITLADSSNMAFVN-QPFVQEYNGSVPAGLVSSRTAKIDQASAVIDNLVKGKA 190

Query: 184 LPVKGKLLQTVMEAGPLLKTLLVSGSLPQWRNXXXXXXXXXXXFSIKGCDPEIINLKPVS 363
           LP KG LLQ VMEAGPLL+TLLV+G LP+WRN            SIKGCD  I N K  +
Sbjct: 191 LPQKGNLLQAVMEAGPLLQTLLVAGPLPRWRNPPTLQPFQIPPVSIKGCDTAINNQKTAA 250

Query: 364 NLSYPVLNALXXXXXXXXXXXXQTYPTST----PSG-SITCLNKRKVLYSGVSRDFLHNQ 528
           NLS  V   L                +S+     SG + +C +   +L SGV+   ++NQ
Sbjct: 251 NLSNFVQKPLNSSSYVEMSCGSSQMFSSSMLNFASGHNGSCFSTGGLLTSGVN---INNQ 307

Query: 529 IMSGKRQR 552
           I +GKRQR
Sbjct: 308 IPTGKRQR 315


>emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]
          Length = 347

 Score =  130 bits (327), Expect = 2e-28
 Identities = 86/188 (45%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
 Frame = +1

Query: 4   VSSPDLPNMNMADSSNNRVLSTHTFIQECNCPTVVGIVSSGMSETDPASAVIDKLVKGKS 183
           V+SPDL N+ +ADSSN   ++   F+QE N     G+VSS  ++ D ASAVID LVKGK+
Sbjct: 162 VTSPDLSNITLADSSNMAFVN-QPFVQEYNGSVPAGLVSSRTAKIDQASAVIDNLVKGKA 220

Query: 184 LPVKGKLLQTVMEAGPLLKTLLVSGSLPQWRNXXXXXXXXXXXFSIKGCDPEIINLKPVS 363
           LP KG LLQ VMEAGPLL+TLLV+G LP+WRN            SIKGCD  I N K  +
Sbjct: 221 LPQKGNLLQAVMEAGPLLQTLLVAGPLPRWRNPPTLQPFQIPPVSIKGCDTAINNQKTAA 280

Query: 364 NLSYPVLNALXXXXXXXXXXXXQTYPTST----PSG-SITCLNKRKVLYSGVSRDFLHNQ 528
           NLS  V   L                +S+     SG + +C +   +L SGV+   ++NQ
Sbjct: 281 NLSNFVQKPLNSSSYVEMSCGSSQMFSSSMLNFASGHNGSCFSTGGLLTSGVN---INNQ 337

Query: 529 IMSGKRQR 552
           I +GKRQR
Sbjct: 338 IPTGKRQR 345


>emb|CBI16193.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  107 bits (266), Expect = 3e-21
 Identities = 62/123 (50%), Positives = 74/123 (60%)
 Frame = +1

Query: 4   VSSPDLPNMNMADSSNNRVLSTHTFIQECNCPTVVGIVSSGMSETDPASAVIDKLVKGKS 183
           V+SPDL N+ +ADS+                    G+VSS  ++ D ASAVID LVKGK+
Sbjct: 108 VTSPDLSNITLADST--------------------GLVSSRTAKIDQASAVIDNLVKGKA 147

Query: 184 LPVKGKLLQTVMEAGPLLKTLLVSGSLPQWRNXXXXXXXXXXXFSIKGCDPEIINLKPVS 363
           LP KG LLQ VMEAGPLL+TLLV+G LP+WRN            SIKGCD  I N K  +
Sbjct: 148 LPQKGNLLQAVMEAGPLLQTLLVAGPLPRWRNPPTLQPFQIPPVSIKGCDTAINNQKTAA 207

Query: 364 NLS 372
           NLS
Sbjct: 208 NLS 210


>ref|XP_004148236.1| PREDICTED: uncharacterized protein LOC101217302 [Cucumis sativus]
           gi|449519210|ref|XP_004166628.1| PREDICTED:
           uncharacterized LOC101217302 [Cucumis sativus]
          Length = 296

 Score =  105 bits (262), Expect = 8e-21
 Identities = 76/198 (38%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
 Frame = +1

Query: 4   VSSPDLPNMNMADSSNNRVLSTHTFIQECNC----PTVVGIVSSGMSETDPASAVIDKLV 171
           VSSPD    NMADSS    ++   F+ E N     P   G+ +    + DP SAVID L 
Sbjct: 106 VSSPDFSTANMADSSKISFVN-QPFVPEYNNAPQPPLATGLDTPKTEKPDPFSAVIDNLA 164

Query: 172 KGKSLPVKGKLLQTVMEAGPLLKTLLVSGSLPQWRNXXXXXXXXXXXFSIKGCDPEIINL 351
           KG++LP KGKLLQ V EAGPLL+TLLV+G LPQWRN             + GC+ + I+ 
Sbjct: 165 KGRALPQKGKLLQAVTEAGPLLQTLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNIDQ 224

Query: 352 KPVSNLS-------YPVLNA--LXXXXXXXXXXXXQTYPTSTPSGSITCLNKRKVLYSGV 504
            P S  S       + +L+A  L                T+ PSGS  C N   ++   V
Sbjct: 225 NPSSKASSSSQKPLHSLLHAEMLSRGSSQICSASSMLSFTNGPSGS--CFNSALMMAPNV 282

Query: 505 SRDFLHNQIMSGKRQRCQ 558
           +    H QI+  KRQ+ Q
Sbjct: 283 N----HPQILGAKRQKIQ 296


>ref|XP_002531117.1| conserved hypothetical protein [Ricinus communis]
           gi|223529313|gb|EEF31282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score =  102 bits (253), Expect = 8e-20
 Identities = 72/195 (36%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
 Frame = +1

Query: 4   VSSPDLPNMNMADSSNNRVLSTHTFIQECNCPTVVGIVSSGMSETDPASAVIDKLVKGKS 183
           V+SPD  ++NMADSS   +++  T++QE +     G+V+  + + DPA A  D LV GK 
Sbjct: 132 VTSPDFSSINMADSSCINLVNK-TYVQEYSGSMSTGLVAPLIPKIDPADAAFDNLVTGKV 190

Query: 184 LPVKGKLLQTVMEAGPLLKTLLVSGSLPQWRNXXXXXXXXXXXFSIKGCDPEII------ 345
           LP +GKLLQ V EAGPLL+TLLV+G LP+WRN            SIKGC+   I      
Sbjct: 191 LPEQGKLLQAVTEAGPLLQTLLVAGPLPRWRNPPPLQSFRIPPVSIKGCENSNIVTQKLA 250

Query: 346 ------NLKPVSNLSYPVLNALXXXXXXXXXXXXQTYPTSTPSGSITCLNKRKVLYSGVS 507
                   KPV+  SYP ++               +  + +  GS   LN   +      
Sbjct: 251 ANAKSSAKKPVNLTSYPDMSRGSSHMCSASMLNFTSGASGSGLGSGWSLNSDGI------ 304

Query: 508 RDFLHNQIMSGKRQR 552
                NQI +GKRQR
Sbjct: 305 -----NQIPAGKRQR 314


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