BLASTX nr result

ID: Coptis23_contig00034779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034779
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   138   4e-31
emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]   138   4e-31
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
dbj|BAF02552.1| hypothetical protein [Nicotiana benthamiana]          136   2e-30
ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   134   6e-30

>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/104 (62%), Positives = 82/104 (78%)
 Frame = +3

Query: 6   KTALQVMLNACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELNFCILDHLCSCADGRA 185
           K AL V++  CPWGRNK ++IEAGAVF LIE++L  P+K+ +E+ FC+L HLCSCADGRA
Sbjct: 253 KAALYVLMEVCPWGRNKWQMIEAGAVFQLIEMELENPEKKITEIIFCLLGHLCSCADGRA 312

Query: 186 NFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVL 317
            FLAH   +AM++K+I RVS  TDDRA+ I+A I KFS TNEVL
Sbjct: 313 QFLAHAGSMAMLSKRILRVSNTTDDRALHIIALISKFSGTNEVL 356


>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/104 (62%), Positives = 82/104 (78%)
 Frame = +3

Query: 6   KTALQVMLNACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELNFCILDHLCSCADGRA 185
           K AL V++  CPWGRNK ++IEAGAVF LIE++L  P+K+ +E+ FC+L HLCSCADGRA
Sbjct: 253 KAALYVLMEVCPWGRNKWQMIEAGAVFQLIEMELENPEKKITEIIFCLLGHLCSCADGRA 312

Query: 186 NFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVL 317
            FLAH   +AM++K+I RVS  TDDRA+ I+A I KFS TNEVL
Sbjct: 313 QFLAHAGSMAMLSKRILRVSNTTDDRALHIIALISKFSGTNEVL 356


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/102 (61%), Positives = 82/102 (80%)
 Frame = +3

Query: 12  ALQVMLNACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELNFCILDHLCSCADGRANF 191
           ALQV+LNACPWGRN+  ++E+GAVF+LIEL+L  P++RT+ELN  +L HLC CA+GRA F
Sbjct: 250 ALQVLLNACPWGRNRKMMVESGAVFELIELELGSPERRTTELNLGVLFHLCCCAEGRAQF 309

Query: 192 LAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVL 317
           L+H   IA+V K+I RVSP  DDRA+ IL+ ICKFS T+ V+
Sbjct: 310 LSHGGSIAVVAKRILRVSPAVDDRAILILSQICKFSGTSMVI 351


>dbj|BAF02552.1| hypothetical protein [Nicotiana benthamiana]
          Length = 425

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/104 (63%), Positives = 84/104 (80%)
 Frame = +3

Query: 6   KTALQVMLNACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELNFCILDHLCSCADGRA 185
           K ALQV+++AC WGRN++KI+E+GA+F+LIEL+LS P+KR SEL FC+L +LC  ADGRA
Sbjct: 260 KAALQVLIDACLWGRNRLKIVESGAIFELIELELSNPEKRVSELVFCLLANLCVLADGRA 319

Query: 186 NFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVL 317
             L H AGIA+VTK+  R+S  TDD A++IL  I KFSATNEVL
Sbjct: 320 ELLKHAAGIAVVTKRTLRISSATDDSALQILGLISKFSATNEVL 363


>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/102 (61%), Positives = 83/102 (81%)
 Frame = +3

Query: 12  ALQVMLNACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELNFCILDHLCSCADGRANF 191
           AL+V+ +ACPWGRN++ +++AGAVF+LIEL+  +P+K+T+EL   IL HLCSCADGRA F
Sbjct: 250 ALKVLSHACPWGRNRIMMVDAGAVFELIELEWRYPEKKTTELILGILFHLCSCADGRAKF 309

Query: 192 LAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVL 317
           L+H  GIA+V K+I +VSP  DDRAV IL+ ICKFS T+ VL
Sbjct: 310 LSHRGGIAVVAKRILKVSPAADDRAVLILSLICKFSGTSMVL 351


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