BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034772
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   133   1e-29
ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   103   2e-20
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S...    99   5e-19

>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/96 (67%), Positives = 77/96 (80%)
 Frame = +2

Query: 2   AVSLFEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGYVFNRRP 181
           A  LF+EMPE++LVS N MIDGYGKCG+CE AE++FE MS +DVV+WT MIS YV NR P
Sbjct: 194 ASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCP 253

Query: 182 KEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVE 289
            + LD FR+ML  G++PD  AIVSVLS IADLGFVE
Sbjct: 254 MKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVE 289


>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/93 (60%), Positives = 71/93 (76%)
 Frame = +2

Query: 11  LFEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGYVFNRRPKEG 190
           +F+ MP +++VSWN MI GY K G+ E A+++FE MS +DVV+WT MIS YV NR P + 
Sbjct: 166 VFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKA 225

Query: 191 LDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVE 289
           LD FR+ML  G++PD  AIVSVLS IADLGFVE
Sbjct: 226 LDLFREMLSLGLRPDGPAIVSVLSAIADLGFVE 258


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/92 (50%), Positives = 65/92 (70%)
 Frame = +2

Query: 14  FEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGYVFNRRPKEGL 193
           F+ MP ++LVSWN MIDGY K G+ E A EIF++M  ++V+SW+ MI GY  +R  KE L
Sbjct: 231 FDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEAL 290

Query: 194 DAFRKMLCSGIKPDAAAIVSVLSGIADLGFVE 289
           + FR+MLC GIKPD  ++V  +S  + LG ++
Sbjct: 291 NLFRQMLCQGIKPDRVSVVGAVSACSQLGALD 322



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +2

Query: 2   AVSLFEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGY 163
           A ++F+   EK+LVSWN M+ GY  CG+ E A+ +F+ M  RDVVSW+ MI GY
Sbjct: 164 ARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGY 217


>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  102 bits (255), Expect = 3e-20
 Identities = 46/92 (50%), Positives = 65/92 (70%)
 Frame = +2

Query: 14  FEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGYVFNRRPKEGL 193
           F+ MP ++LVSWN MIDGY K G+ E A EIF++M  ++V+SW+ MI GY  +R  KE L
Sbjct: 231 FDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEAL 290

Query: 194 DAFRKMLCSGIKPDAAAIVSVLSGIADLGFVE 289
           + FR+MLC GIKPD  ++V  +S  + LG ++
Sbjct: 291 NLFRQMLCQGIKPDRVSVVGAVSACSQLGALD 322



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +2

Query: 2   AVSLFEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGY 163
           A ++F+   EK+LVSWN M+ GY  CG+ E A+ +F+ M  RDVVSW+ MI GY
Sbjct: 164 ARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGY 217


>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
           gi|241927367|gb|EES00512.1| hypothetical protein
           SORBIDRAFT_03g010050 [Sorghum bicolor]
          Length = 506

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/96 (48%), Positives = 65/96 (67%)
 Frame = +2

Query: 2   AVSLFEEMPEKNLVSWNIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGYVFNRRP 181
           A S+F EM  +++V+WN+MI GY K G    A E+F+ M  R+VVSWT +I GY   RRP
Sbjct: 133 ARSVFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRP 192

Query: 182 KEGLDAFRKMLCSGIKPDAAAIVSVLSGIADLGFVE 289
           +E ++ FR+M   GI+PD  A++SVLS   DLG V+
Sbjct: 193 EEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVD 228



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
 Frame = +2

Query: 50  NIMIDGYGKCGKCEQAEEIFERMSCRDVVSWTCMISGYVFNRRPKEGLDAFRKMLCSGIK 229
           N +ID Y KCG  E+A E+FE M  + VV+WT +I+G+  +    + ++ FR+M    + 
Sbjct: 250 NSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMA 309

Query: 230 PDAAAIVSVLS-----GIADLG 280
           P+    +++LS     G+ DLG
Sbjct: 310 PNDVTFLAILSACSHVGLTDLG 331