BLASTX nr result

ID: Coptis23_contig00034769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034769
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002517413.1| amino acid permease, putative [Ricinus commu...   126   2e-27
ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transpor...   117   1e-24
ref|XP_003618370.1| Peptide transporter family [Medicago truncat...   117   1e-24

>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/125 (50%), Positives = 72/125 (57%)
 Frame = +1

Query: 1   LLALTATAFTWDXXXXXXXXXXXXXXXXXXXXXGQGGYNPCLQAFGASQLDIDDELPCXX 180
           L+ALT+TA  W                      GQGGYNP LQAFGA Q+  DDELPC  
Sbjct: 92  LVALTSTALAWARHPTNNISSSYLFWSLCLISLGQGGYNPSLQAFGADQIPNDDELPCTK 151

Query: 181 XXXXXXXXXXXXXXWWYFGICSGSLLGVSFMSYLQDTFGWGLGFAIPTIAMALSVLPFLC 360
                         WWYFG+C GSL GV+ MSY+QDTFGW LGFAIPTIAM  S+L F C
Sbjct: 152 DEQKSNKKSLFFQ-WWYFGVCGGSLAGVTVMSYIQDTFGWALGFAIPTIAMTASILLFWC 210

Query: 361 GNRFF 375
           G+R +
Sbjct: 211 GSRIY 215


>ref|XP_002517413.1| amino acid permease, putative [Ricinus communis]
           gi|223543424|gb|EEF44955.1| amino acid permease,
           putative [Ricinus communis]
          Length = 536

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/125 (51%), Positives = 74/125 (59%)
 Frame = +1

Query: 1   LLALTATAFTWDXXXXXXXXXXXXXXXXXXXXXGQGGYNPCLQAFGASQLDIDDELPCXX 180
           L+ALT+TA TW                      GQGGYNP LQAFGA QL+ DDELP   
Sbjct: 93  LMALTSTALTWAWYPPNKRSSTFLYWSLGLISVGQGGYNPSLQAFGADQLESDDELPSTK 152

Query: 181 XXXXXXXXXXXXXXWWYFGICSGSLLGVSFMSYLQDTFGWGLGFAIPTIAMALSVLPFLC 360
                         WWYFG+C GSLLGV+ MSY+QDTFGW LGFAIPTIAM  S++ F C
Sbjct: 153 DDRKSNKKSLFFQ-WWYFGVCGGSLLGVTVMSYIQDTFGWVLGFAIPTIAMISSIVIFCC 211

Query: 361 GNRFF 375
           G+R +
Sbjct: 212 GSRVY 216


>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/125 (49%), Positives = 72/125 (57%)
 Frame = +1

Query: 1   LLALTATAFTWDXXXXXXXXXXXXXXXXXXXXXGQGGYNPCLQAFGASQLDIDDELPCXX 180
           L+ALT+TA +W                      GQGGYNP LQAFGA Q+  DDELP   
Sbjct: 92  LVALTSTALSWARHPTNKISSSYLFWSLCLISLGQGGYNPSLQAFGADQIANDDELPSTK 151

Query: 181 XXXXXXXXXXXXXXWWYFGICSGSLLGVSFMSYLQDTFGWGLGFAIPTIAMALSVLPFLC 360
                         WWYFG+C GSL GV+ MSY+QDTFGW LGFAIPTIAM  S+L F C
Sbjct: 152 DEQKSNKKSLFFQ-WWYFGVCGGSLAGVTVMSYIQDTFGWVLGFAIPTIAMGASILLFWC 210

Query: 361 GNRFF 375
           G+R +
Sbjct: 211 GSRIY 215


>ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Vitis vinifera]
          Length = 533

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/132 (47%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
 Frame = +1

Query: 1   LLALTATAF--TWDXXXXXXXXXXXXXXXXXXXXXGQGGYNPCLQAFGASQLDIDDELPC 174
           LLALT+TA   TW                      G GGYNP LQAFGA QL+ +++LPC
Sbjct: 93  LLALTSTALVGTW-IPEDRTSGSSFLFWSLYLISLGLGGYNPSLQAFGADQLETEEDLPC 151

Query: 175 XXXXXXXXXXXXXXXXWWYFGICSGSLLGVSFMSYLQDTFGWGLGFAIPTIAMALSVLPF 354
                           WWYFGICSGSLLGV+ MSY+QDT GWG+GFAIPTI M  S+  F
Sbjct: 152 TKDEKNPDSKSLFFQ-WWYFGICSGSLLGVTVMSYIQDTSGWGIGFAIPTIVMIASIAFF 210

Query: 355 LCGNRFFYIHEE 390
            CG RF+   ++
Sbjct: 211 SCGTRFYTYRQD 222


>ref|XP_003618370.1| Peptide transporter family [Medicago truncatula]
           gi|355493385|gb|AES74588.1| Peptide transporter family
           [Medicago truncatula]
          Length = 538

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/97 (54%), Positives = 65/97 (67%)
 Frame = +1

Query: 100 GQGGYNPCLQAFGASQLDIDDELPCXXXXXXXXXXXXXXXXWWYFGICSGSLLGVSFMSY 279
           GQGGYNP LQAFGA QL  D+ELPC                WWYFG+C+GSL+GV+ MSY
Sbjct: 124 GQGGYNPSLQAFGADQLGEDEELPCSNTDDTSSNKKALFFQWWYFGVCAGSLMGVTVMSY 183

Query: 280 LQDTFGWGLGFAIPTIAMALSVLPFLCGNRFFYIHEE 390
           +QDTFGW +GFAIP I+M LS+L F  G+  +   E+
Sbjct: 184 IQDTFGWVIGFAIPAISMLLSILIFSSGSSIYSYKEQ 220


Top