BLASTX nr result

ID: Coptis23_contig00034764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034764
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515858.1| conserved hypothetical protein [Ricinus comm...   107   1e-21
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...   106   2e-21
gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indi...   103   2e-20
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...   101   7e-20
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...   101   7e-20

>ref|XP_002515858.1| conserved hypothetical protein [Ricinus communis]
           gi|223545013|gb|EEF46527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/158 (34%), Positives = 81/158 (51%)
 Frame = -2

Query: 497 KPPSRQSWLCLGDLNEVLELEEKRGRVPFSPSKAQWLIQAMNNYELFDIGYKGPVFTWCN 318
           KPP   S +C+GD + ++   EK+G       + Q     +N  EL D+G+KG ++TW N
Sbjct: 102 KPPPHSSLVCVGDFSSIVSPSEKKGGRRPDDKQLQLFSDFVNRNELIDVGFKGTMYTWSN 161

Query: 317 GQKGQNRTHERIDRALANVEWRLCFPNDCLYH*HSIESDHKMLVIKPNTTTPYHPRPFRF 138
            Q G     ER+DRALA++EWR  FPN  + H + + SDH  LV+     +    R FRF
Sbjct: 162 KQLGDKCVMERLDRALASLEWRCQFPNAQIIHEYMLGSDHHPLVLMEQAGSFSKKRLFRF 221

Query: 137 GAFWLEETGCQEVIAEAWQPPVRGSASHVLTEKLKICQ 24
              W     C+EV+ + W    R  +      KL+ C+
Sbjct: 222 EEKWKLRDRCKEVVEDCWMEHQREDSGWNCVTKLQQCK 259


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
 Frame = -2

Query: 488 SRQSWLCLGDLNEVLELEEKRGRVPFSPSKAQWLIQAMNNYELFDIGYKGPVFTWCNGQ- 312
           + Q+WLC GD NEVL   EK G VP   +      QA+   EL D+G++G VFTW N Q 
Sbjct: 376 NNQAWLCAGDFNEVLYQHEKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQS 435

Query: 311 KGQNRTHERIDRALANVEWRLCFPNDCLYH*HSIESDHKMLVIKPNT----TTPYHPRPF 144
           KG++   ER+DRA+AN EW   FP   + +  +  SDH+ LV+          P    PF
Sbjct: 436 KGESHIRERLDRAVANFEWLAKFPLVRVKNGDTYHSDHRALVVCTEDDLVGRKPKAQGPF 495

Query: 143 RFGAFWLEETGCQEVIAEAWQ 81
           +F A WL+E G ++++ E W+
Sbjct: 496 KFEAEWLKEEGFKDIVKEGWE 516


>gb|EEC77009.1| hypothetical protein OsI_15342 [Oryza sativa Indica Group]
          Length = 815

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/133 (38%), Positives = 74/133 (55%)
 Frame = -2

Query: 467 LGDLNEVLELEEKRGRVPFSPSKAQWLIQAMNNYELFDIGYKGPVFTWCNGQKGQNRTHE 288
           +GDLNE++ + EK G VP +  +       +NN  L D+GY GP +TW N Q G++   +
Sbjct: 1   MGDLNEIMHVNEKFGSVPPNQVRINIFKHYVNNIGLMDLGYNGPAYTWSNKQHGKDLVLQ 60

Query: 287 RIDRALANVEWRLCFPNDCLYH*HSIESDHKMLVIKPNTTTPYHPRPFRFGAFWLEETGC 108
           R+DR LANVEW + FPN  +YH   + SDH  ++   N  +    R F+F  +WL E+  
Sbjct: 61  RLDRCLANVEWCMNFPNTTVYHLPMLYSDHAPIIAILNPKSRRPRRSFKFENWWLLESDF 120

Query: 107 QEVIAEAWQPPVR 69
            +    AWQ   R
Sbjct: 121 NQEAKAAWQKTER 133


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/135 (37%), Positives = 71/135 (52%)
 Frame = -2

Query: 488  SRQSWLCLGDLNEVLELEEKRGRVPFSPSKAQWLIQAMNNYELFDIGYKGPVFTWCNGQK 309
            S +   C+GDLNE++   EK G  P + ++       +NN  L D+GY GP +TW N Q+
Sbjct: 899  SHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQ 958

Query: 308  GQNRTHERIDRALANVEWRLCFPNDCLYH*HSIESDHKMLVIKPNTTTPYHPRPFRFGAF 129
            G++   ER+DR LANVEW   +PN  +YH   + SDH  ++   N       R F F  +
Sbjct: 959  GKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENW 1018

Query: 128  WLEETGCQEVIAEAW 84
            WL E    +    AW
Sbjct: 1019 WLLEPDFNQHAHSAW 1033


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/135 (37%), Positives = 71/135 (52%)
 Frame = -2

Query: 488 SRQSWLCLGDLNEVLELEEKRGRVPFSPSKAQWLIQAMNNYELFDIGYKGPVFTWCNGQK 309
           S +   C+GDLNE++   EK G  P + ++       +NN  L D+GY GP +TW N Q+
Sbjct: 123 SHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQ 182

Query: 308 GQNRTHERIDRALANVEWRLCFPNDCLYH*HSIESDHKMLVIKPNTTTPYHPRPFRFGAF 129
           G++   ER+DR LANVEW   +PN  +YH   + SDH  ++   N       R F F  +
Sbjct: 183 GKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENW 242

Query: 128 WLEETGCQEVIAEAW 84
           WL E    +    AW
Sbjct: 243 WLLEPDFNQHAHSAW 257


Top