BLASTX nr result

ID: Coptis23_contig00034759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034759
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu...   196   3e-48
ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [...   189   4e-46
ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [...   181   2e-43
ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [...   179   5e-43
gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Ara...   157   2e-36

>ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
           gi|223548827|gb|EEF50316.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 465

 Score =  196 bits (499), Expect = 3e-48
 Identities = 125/221 (56%), Positives = 141/221 (63%), Gaps = 8/221 (3%)
 Frame = +2

Query: 23  MAMDALVP---SSSGIRFAH--DPTKRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKK 187
           M MDALVP    S   R AH  D    G+      G C  G STR  SC    +  + + 
Sbjct: 131 MTMDALVPCTKQSDDHRSAHVIDSVPAGIG-----GNCVVGSSTRVGSCSAPTTATQDE- 184

Query: 188 VEETMVRKRARVPRAVLAREDCSRNQSVSVSNTFGRKRKYVRGVDSCEMELDTGFTSTSL 367
            E  +  KRARV R  +A E  SR+QSVS S TFGR   +V  +D+CEM+L  GFTSTS 
Sbjct: 185 -EALLAAKRARVARVPVAPEWSSRDQSVSGSATFGRDSHHVT-LDTCEMDLGVGFTSTSF 242

Query: 368 GSDTNPNT---FDDRDSVSHSKPQKQARTEEAKSGHNEKSSISTKRSRAAAIHNQSERKR 538
           GS  N  T    D+ DSV HS        ++ K   N KSS+STKRSRAAAIHNQSERKR
Sbjct: 243 GSQENTKTATAVDENDSVCHSD-------DDDKQKANGKSSVSTKRSRAAAIHNQSERKR 295

Query: 539 RDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKTLQAQI 661
           RDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLK LQAQ+
Sbjct: 296 RDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 336


>ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 458

 Score =  189 bits (481), Expect = 4e-46
 Identities = 121/222 (54%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
 Frame = +2

Query: 23  MAMDALVPSSSGIRFAHDPTKRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVEETM 202
           + MDALVP S+      + +K+GM+   G GTC  G STR  SC G     KG K     
Sbjct: 130 VTMDALVPCSN-----REQSKQGMESVPG-GTCMVGCSTRVGSCCGG----KGAK----- 174

Query: 203 VRKRARVPRAVLAREDCSRNQSVSVSNTFGRKRKYVRGVDSCEMELDTGFTSTSLGSDTN 382
                         E   R+QSVS S TFGR  K+V  +D+C+ E   GFTSTS+ S  N
Sbjct: 175 ------------GHEATGRDQSVSGSATFGRDSKHVT-LDTCDREFGVGFTSTSINSLEN 221

Query: 383 PN---------TFDDRDSVSHSKPQKQARTEEAKSGHNEKSSISTKRSRAAAIHNQSERK 535
            +         T DD DSVSHSKP  + + E  K   N KSS+STKRSRAAAIHNQSERK
Sbjct: 222 TSSAKHCTKTTTVDDHDSVSHSKPVGEDQDEGKKKRANGKSSVSTKRSRAAAIHNQSERK 281

Query: 536 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKTLQAQI 661
           RRDKINQRMKTLQKLVPNSSK+DKASMLDEVIEYLK LQAQ+
Sbjct: 282 RRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQL 323


>ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
          Length = 465

 Score =  181 bits (458), Expect = 2e-43
 Identities = 115/217 (52%), Positives = 138/217 (63%), Gaps = 3/217 (1%)
 Frame = +2

Query: 20  AMAMDALVPSSSGIRFAHD--PTKRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVE 193
           AM MDALVP S+     ++  P+        G+G C  G STR  SC G A+    K  +
Sbjct: 127 AMTMDALVPCSNNNNTTNNNNPSHVMDSVPAGLGPCGGGSSTRVGSCSGGAT----KDDD 182

Query: 194 ETMVRKRARVPRAVLAREDCSRNQSVSVSNTFGRKRKYVRGVDSCEMELDTGFTSTSLGS 373
             +  KR RV R     +  SR+QSV+ S TF    + V  +D+C++       +TS G 
Sbjct: 183 AILPGKRERVARVPSTHDWSSRDQSVTGSATFDLDSQQVT-LDTCDLGSPE---NTSSGK 238

Query: 374 D-TNPNTFDDRDSVSHSKPQKQARTEEAKSGHNEKSSISTKRSRAAAIHNQSERKRRDKI 550
             T   T DD DSV HS+PQ++A  EE K     KSS+S+KRSRAAAIHNQSERKRRDKI
Sbjct: 239 PCTKTITVDDHDSVCHSRPQRRAGDEEDKKRGTGKSSVSSKRSRAAAIHNQSERKRRDKI 298

Query: 551 NQRMKTLQKLVPNSSKTDKASMLDEVIEYLKTLQAQI 661
           NQRMKTLQKLVPNSSKTDKASMLDEVIEYLK LQAQ+
Sbjct: 299 NQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 335


>ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 459

 Score =  179 bits (454), Expect = 5e-43
 Identities = 119/228 (52%), Positives = 134/228 (58%), Gaps = 9/228 (3%)
 Frame = +2

Query: 5   TIVPGAMAMDALVPSSSGIRFAHDPTKRGMDPNQGVGTCATGKSTRAESCGGTASFEKGK 184
           T     M MDALVP S+         K+GM+   G GTC  G STR  SC G     KG 
Sbjct: 130 TTTTNTMTMDALVPCSN----REQGKKKGME--SGPGTCMVGCSTRVGSCCGG----KGA 179

Query: 185 KVEETMVRKRARVPRAVLAREDCSRNQSVSVSNTFGRKRKYVRGVDSCEMELDTGFTSTS 364
           K                   E   R+QSVS S TFGR  K+V  +D+C+ E    FTSTS
Sbjct: 180 K-----------------GHEASGRDQSVSGSATFGRDSKHVT-LDTCDREFGVAFTSTS 221

Query: 365 LGSDTNPN---------TFDDRDSVSHSKPQKQARTEEAKSGHNEKSSISTKRSRAAAIH 517
           + S  N +         T ++ DSVSH+        EE K   N KSS+STKRSRAAAIH
Sbjct: 222 INSLENTSYAKHCTKTTTIEEHDSVSHNGD------EEKKKRANGKSSVSTKRSRAAAIH 275

Query: 518 NQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKTLQAQI 661
           NQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLK LQAQ+
Sbjct: 276 NQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 323


>gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
          Length = 399

 Score =  157 bits (397), Expect = 2e-36
 Identities = 108/214 (50%), Positives = 123/214 (57%)
 Frame = +2

Query: 20  AMAMDALVPSSSGIRFAHDPTKRGMDPNQGVGTCATGKSTRAESCGGTASFEKGKKVEET 199
           AMAMDALVP S+ +      +K G     GVG+   G  +   + GG             
Sbjct: 102 AMAMDALVPCSNLVH--EQQSKPG-----GVGSTRVGSCSDGRTMGGG------------ 142

Query: 200 MVRKRARVPRAVLAREDCSRNQSVSVSNTFGRKRKYVRGVDSCEMELDTGFTSTSLGSDT 379
              KRARV     A E           +T+                 D GFTSTS+GS  
Sbjct: 143 ---KRARV-----APEWSGGGSQRLTMDTY-----------------DVGFTSTSMGS-- 175

Query: 380 NPNTFDDRDSVSHSKPQKQARTEEAKSGHNEKSSISTKRSRAAAIHNQSERKRRDKINQR 559
           + NT DD DSV HS+PQ +   E+   G   KSS+STKRSRAAAIHNQSERKRRDKINQR
Sbjct: 176 HDNTIDDHDSVCHSRPQMEDEEEKKAGG---KSSVSTKRSRAAAIHNQSERKRRDKINQR 232

Query: 560 MKTLQKLVPNSSKTDKASMLDEVIEYLKTLQAQI 661
           MKTLQKLVPNSSKTDKASMLDEVIEYLK LQAQ+
Sbjct: 233 MKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266


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