BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034737
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   182   2e-44
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              179   2e-43
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   179   3e-43
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   179   3e-43
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   177   6e-43

>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/119 (68%), Positives = 102/119 (85%)
 Frame = -1

Query: 357  QFHGAAIFSKIDLRSGYHQIRVRPGDEWKTAFKTRNGLFEWMVMPFGFSNAPSTFMCLMN 178
            + HGA IFSKIDLR GYHQIR++ GDEWKTAFKT+NGL+EW+VMPFG +NAPSTFM LMN
Sbjct: 740  ELHGAKIFSKIDLRRGYHQIRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMN 799

Query: 177  HVFKTFLGQFVVVYFNDILVYSKDQESHLKHLRQVFKVLREQRLYANLKKCQFLSPSLV 1
            HV + F+G+FVVVYF+DIL+YSKD + H+ HL++VF VLR ++LYANL+KC F   S+V
Sbjct: 800  HVLRNFIGKFVVVYFDDILIYSKDPQKHIIHLKEVFLVLRREQLYANLEKCYFGVESVV 858


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  179 bits (455), Expect = 2e-43
 Identities = 79/119 (66%), Positives = 103/119 (86%)
 Frame = -1

Query: 357  QFHGAAIFSKIDLRSGYHQIRVRPGDEWKTAFKTRNGLFEWMVMPFGFSNAPSTFMCLMN 178
            + HG++IFSK+DL+SGYHQIR++ GDEWKTAFKT  GL+EW+VMPFG +NAPSTFM LMN
Sbjct: 989  ELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMN 1048

Query: 177  HVFKTFLGQFVVVYFNDILVYSKDQESHLKHLRQVFKVLREQRLYANLKKCQFLSPSLV 1
            HV + F+G+FV+VYF+DILVYSK  E H++HL+ V +VLR+++LYANLKKC F + +LV
Sbjct: 1049 HVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLV 1107


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/113 (70%), Positives = 100/113 (88%)
 Frame = -1

Query: 357  QFHGAAIFSKIDLRSGYHQIRVRPGDEWKTAFKTRNGLFEWMVMPFGFSNAPSTFMCLMN 178
            Q  G+ IFSKIDL+SGYHQIR+ PGDEWKTAFKT+ GL+EW+VMPFG +NAPSTFM LMN
Sbjct: 780  QLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 839

Query: 177  HVFKTFLGQFVVVYFNDILVYSKDQESHLKHLRQVFKVLREQRLYANLKKCQF 19
            HVFK F G+F+VVYF+DIL++S++ + HL+HL++VF+VLR QRL+ANLKKC F
Sbjct: 840  HVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTF 892


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/113 (70%), Positives = 100/113 (88%)
 Frame = -1

Query: 357  QFHGAAIFSKIDLRSGYHQIRVRPGDEWKTAFKTRNGLFEWMVMPFGFSNAPSTFMCLMN 178
            Q  G+ IFSKIDL+SGYHQIR+ PGDEWKTAFKT+ GL+EW+VMPFG +NAPSTFM LMN
Sbjct: 780  QLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 839

Query: 177  HVFKTFLGQFVVVYFNDILVYSKDQESHLKHLRQVFKVLREQRLYANLKKCQF 19
            HVFK F G+F+VVYF+DIL++S++ + HL+HL++VF+VLR QRL+ANLKKC F
Sbjct: 840  HVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTF 892


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  177 bits (450), Expect = 6e-43
 Identities = 78/116 (67%), Positives = 99/116 (85%)
 Frame = -1

Query: 348  GAAIFSKIDLRSGYHQIRVRPGDEWKTAFKTRNGLFEWMVMPFGFSNAPSTFMCLMNHVF 169
            G+ IFSKIDLRSGYHQIR+RPGDEWKT+FKT++GL+EW+VMPFG +NAPSTFM +M  V 
Sbjct: 705  GSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVL 764

Query: 168  KTFLGQFVVVYFNDILVYSKDQESHLKHLRQVFKVLREQRLYANLKKCQFLSPSLV 1
            K F+G+FVVVYF+DIL+YS+  E H +HL+QV + LR ++ Y NLKKC F+SPS+V
Sbjct: 765  KPFIGRFVVVYFDDILIYSRSCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVV 820