BLASTX nr result
ID: Coptis23_contig00034735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00034735 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20302.3| unnamed protein product [Vitis vinifera] 61 1e-07 ref|XP_002282417.1| PREDICTED: uncharacterized protein LOC100246... 61 1e-07 emb|CAN74978.1| hypothetical protein VITISV_027198 [Vitis vinifera] 61 1e-07 ref|XP_002305132.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 gb|ABK95008.1| unknown [Populus trichocarpa] 56 3e-06 >emb|CBI20302.3| unnamed protein product [Vitis vinifera] Length = 541 Score = 60.8 bits (146), Expect = 1e-07 Identities = 32/57 (56%), Positives = 35/57 (61%) Frame = -2 Query: 309 RNFVVQAYHRDLLEHIAPPIATALHPPPILTKERPAKSSPVITTNRVERTPARKTPP 139 RNFV QAYHRDLLEH+APP +HPPP + VI N RTPARK PP Sbjct: 459 RNFVYQAYHRDLLEHMAPP-PPVVHPPPRDVVIPGNRQGAVIPENVAGRTPARKNPP 514 >ref|XP_002282417.1| PREDICTED: uncharacterized protein LOC100246918 [Vitis vinifera] Length = 604 Score = 60.8 bits (146), Expect = 1e-07 Identities = 32/57 (56%), Positives = 35/57 (61%) Frame = -2 Query: 309 RNFVVQAYHRDLLEHIAPPIATALHPPPILTKERPAKSSPVITTNRVERTPARKTPP 139 RNFV QAYHRDLLEH+APP +HPPP + VI N RTPARK PP Sbjct: 522 RNFVYQAYHRDLLEHMAPP-PPVVHPPPRDVVIPGNRQGAVIPENVAGRTPARKNPP 577 >emb|CAN74978.1| hypothetical protein VITISV_027198 [Vitis vinifera] Length = 616 Score = 60.8 bits (146), Expect = 1e-07 Identities = 32/57 (56%), Positives = 35/57 (61%) Frame = -2 Query: 309 RNFVVQAYHRDLLEHIAPPIATALHPPPILTKERPAKSSPVITTNRVERTPARKTPP 139 RNFV QAYHRDLLEH+APP +HPPP + VI N RTPARK PP Sbjct: 534 RNFVYQAYHRDLLEHMAPP-PPVVHPPPRDVVIPGNRQGAVIPENVAGRTPARKNPP 589 >ref|XP_002305132.1| predicted protein [Populus trichocarpa] gi|222848096|gb|EEE85643.1| predicted protein [Populus trichocarpa] Length = 591 Score = 56.2 bits (134), Expect = 3e-06 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Frame = -2 Query: 309 RNFVVQAYHRDLLEHIA---------PPIATALHP-PPILTKERPAKSSPVITTNRVERT 160 RNFVVQ YHRD+LE +A PP L P PP+L E P +++P +T +V Sbjct: 501 RNFVVQKYHRDVLEQMAHPPPVYPPPPPSLLQLPPSPPVLVNEPPIQTTPETSTVKVIGA 560 Query: 159 PARKTPPXXXXXXXXXXXRKITAGTRD 79 P RK P RK+ AG +D Sbjct: 561 PVRKAPARRGRRSGSRRHRKVVAGAKD 587 >gb|ABK95008.1| unknown [Populus trichocarpa] Length = 98 Score = 56.2 bits (134), Expect = 3e-06 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Frame = -2 Query: 309 RNFVVQAYHRDLLEHIA---------PPIATALHP-PPILTKERPAKSSPVITTNRVERT 160 RNFVVQ YHRD+LE +A PP L P PP+L E P +++P +T +V Sbjct: 8 RNFVVQKYHRDVLEQMAHPPPVYPPPPPSLLQLPPSPPVLVNEPPIQTTPETSTVKVIGA 67 Query: 159 PARKTPPXXXXXXXXXXXRKITAGTRD 79 P RK P RK+ AG +D Sbjct: 68 PVRKAPARRGRRSGSRRHRKVVAGAKD 94