BLASTX nr result

ID: Coptis23_contig00034722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034722
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like ...   178   4e-43
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   175   4e-42
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like ...   175   5e-42
ref|NP_001058161.1| Os06g0639600 [Oryza sativa Japonica Group] g...   174   6e-42

>ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like [Brachypodium
           distachyon]
          Length = 382

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/115 (76%), Positives = 101/115 (87%)
 Frame = +1

Query: 1   EWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXXKRWQHMADTLLSVRAIPDEDKDLA 180
           +WD++SFIR LKSM+RSSNAVAVITF          KRWQH+ADTLLS++AIPDEDKDLA
Sbjct: 244 DWDMVSFIRSLKSMVRSSNAVAVITFPYTVLSNSFCKRWQHLADTLLSIKAIPDEDKDLA 303

Query: 181 NLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQAPVD 345
            LLTGYQDMVG LHVHKVAQ N+QVPVIL+A+TFS+KL++RRSLVLERLNQAPVD
Sbjct: 304 KLLTGYQDMVGFLHVHKVAQTNSQVPVILEASTFSLKLRKRRSLVLERLNQAPVD 358


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  175 bits (444), Expect = 4e-42
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = +1

Query: 1   EWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXXKRWQHMADTLLSVRAIPDEDKDLA 180
           EWD+LSFIR LK M+R SNAVAVITF          KRWQH+ADTLLSV+AIPDEDK+LA
Sbjct: 223 EWDMLSFIRSLKGMIRDSNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKAIPDEDKELA 282

Query: 181 NLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQAPVD 345
           NLLTGYQDMVGLL+VHKVA +NTQVPVIL+A TFSIKLQ+RR LVLE LNQAPVD
Sbjct: 283 NLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQAPVD 337


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  175 bits (444), Expect = 4e-42
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = +1

Query: 1   EWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXXKRWQHMADTLLSVRAIPDEDKDLA 180
           EWD+LSFIR LK M+R SNAVAVITF          KRWQH+ADTLLSV+AIPDEDK+LA
Sbjct: 224 EWDMLSFIRSLKGMIRDSNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKAIPDEDKELA 283

Query: 181 NLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQAPVD 345
           NLLTGYQDMVGLL+VHKVA +NTQVPVIL+A TFSIKLQ+RR LVLE LNQAPVD
Sbjct: 284 NLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQAPVD 338


>ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like [Cucumis sativus]
           gi|449496395|ref|XP_004160123.1| PREDICTED: elongator
           complex protein 4-like [Cucumis sativus]
          Length = 362

 Score =  175 bits (443), Expect = 5e-42
 Identities = 89/115 (77%), Positives = 99/115 (86%)
 Frame = +1

Query: 1   EWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXXKRWQHMADTLLSVRAIPDEDKDLA 180
           EW++LSF+R LKSM+RSSNAVAV+TF          KRWQHMADTLLSVRAIPDEDK+LA
Sbjct: 224 EWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELA 283

Query: 181 NLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQAPVD 345
            LLTGYQDMVGLL+VHKVAQ+NTQVP IL+A TFSIKLQ+RR LVLE LNQAPVD
Sbjct: 284 KLLTGYQDMVGLLNVHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVD 338


>ref|NP_001058161.1| Os06g0639600 [Oryza sativa Japonica Group]
           gi|51535593|dbj|BAD37537.1| Paxneb protein-like [Oryza
           sativa Japonica Group] gi|51536358|dbj|BAD37489.1|
           Paxneb protein-like [Oryza sativa Japonica Group]
           gi|113596201|dbj|BAF20075.1| Os06g0639600 [Oryza sativa
           Japonica Group] gi|222635954|gb|EEE66086.1| hypothetical
           protein OsJ_22107 [Oryza sativa Japonica Group]
          Length = 377

 Score =  174 bits (442), Expect = 6e-42
 Identities = 85/115 (73%), Positives = 101/115 (87%)
 Frame = +1

Query: 1   EWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXXKRWQHMADTLLSVRAIPDEDKDLA 180
           +WD++SFIR LK+M+R+SNAVAVITF          KRWQH+ADTLLS++AIPDEDK+LA
Sbjct: 239 DWDMVSFIRSLKAMVRASNAVAVITFPNTVLSSSFCKRWQHLADTLLSIKAIPDEDKELA 298

Query: 181 NLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQAPVD 345
            LLTGYQDMVG LHVHKVAQ N+QVPVIL+A+TFS+KL++RRSLVLERLNQAPVD
Sbjct: 299 KLLTGYQDMVGFLHVHKVAQTNSQVPVILEASTFSLKLRKRRSLVLERLNQAPVD 353


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