BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034712
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209...    95   8e-18
ref|XP_003602302.1| F-box family protein [Medicago truncatula] g...    55   7e-06
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    55   1e-05

>ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209996 [Cucumis sativus]
          Length = 416

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
 Frame = -1

Query: 516 DGVFCNGYFYILTSGCNIVAIKASSVVSNDKK-----STFELKPHFHKVGIPPKKKRLGT 352
           D VFCNG  ++L +  NI  I+A+S++S  ++     S  E+K  FH+V      K    
Sbjct: 199 DAVFCNGSLFLLCNDSNIFQIEATSIISYFREDECVISISEIKVQFHEVR---SLKINSQ 255

Query: 351 ATLYYLVESCGEVLLVSRVY--KSERGLHTLAFEVFKLDVCKMAWLKLESLGDRVLFMNR 178
             L YLVES G+VLLV R +  K +  L T+ FE++ LD+ +M+W K+  L DR+LF+ +
Sbjct: 256 HVLKYLVESSGDVLLVCRYFSEKPDAVLETINFEIYSLDLSQMSWEKIVCLDDRILFLGK 315

Query: 177 FGSRCFTPKELGVNVRNCICFTND 106
             SR  +  +LG+ + N I F+ND
Sbjct: 316 CCSRSLSSTDLGILISNRIYFSND 339


>ref|XP_003602302.1| F-box family protein [Medicago truncatula]
           gi|355491350|gb|AES72553.1| F-box family protein
           [Medicago truncatula]
          Length = 434

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = -1

Query: 339 YLVESCGEVLLVSRVYKSE----RGLHTLAFEVFKLDVCKMAWLKLESLGDRVLFMNRFG 172
           +LVES G+ LL+  +Y S      G   L  +VF+LD  +  W+KL SLGDRVLF+    
Sbjct: 275 FLVESEGDQLLLVDIYDSHCFGFPGEDGLKLDVFRLDEKEKKWVKLASLGDRVLFLGNGC 334

Query: 171 SRCFTPKELGVNVRNCICFTND 106
           S   +  +L V   NC+ F++D
Sbjct: 335 SFSASASDLSVVKGNCVIFSDD 356


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
 Frame = -1

Query: 516 DGVFCNGYFYILTSGCNIVAIKASSVVSNDKKSTFELKPHFHKVGIPPKKKRLGTATLYY 337
           D +F NG FY +     IV    SS   +  + +F   P            R     + Y
Sbjct: 214 DVIFVNGMFYAVNKAGQIVICDISS---DSPRVSFMETP------------RQAGGDMQY 258

Query: 336 LVESCGEVLLVSRVYKSERGL-----------HTLAFEVFKLDVCKMAWLKLESLGDRVL 190
           LV S  E+LLV+R    E               T+ FEVF+LD     WL++ +LGD+ L
Sbjct: 259 LVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKAL 318

Query: 189 FMNRFGSRCFTPKELGVNVRNCICFTND 106
           F+    S   +  +    + NCI +T+D
Sbjct: 319 FIGENSSLSLSATDFSGCMGNCIYYTDD 346