BLASTX nr result

ID: Coptis23_contig00034706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034706
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273103.2| PREDICTED: uncharacterized protein LOC100249...   159   3e-37
emb|CAN82898.1| hypothetical protein VITISV_026994 [Vitis vinifera]   159   3e-37
emb|CAN61265.1| hypothetical protein VITISV_013572 [Vitis vinifera]   159   3e-37
ref|XP_003632273.1| PREDICTED: uncharacterized protein LOC100244...   158   5e-37
ref|XP_002523712.1| conserved hypothetical protein [Ricinus comm...   139   2e-31

>ref|XP_002273103.2| PREDICTED: uncharacterized protein LOC100249900 [Vitis vinifera]
          Length = 599

 Score =  159 bits (401), Expect = 3e-37
 Identities = 86/166 (51%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   GFTGLSGAFMTQIYLAVYGNDSKSLLLLIAWFPAALSVVFVYTIRSMKVVRRDNEVKVFY 182
           GF GL GA MTQ Y A+YG+DSK+L+L++ WFPAAL V+FVYTIR+MKVVR+ NEVK+FY
Sbjct: 169 GFVGLGGAIMTQFYFAIYGDDSKALILMVGWFPAALCVIFVYTIRTMKVVRQPNEVKMFY 228

Query: 183 KFLYVALAIASFSMVVTILQKQFAFTHGWYVASASXXXXXXXXXXXIGIKEEHFIWIEKK 362
           +FLYV++ +A F MV+TI+QKQ  F    Y  S +           I I+EE   W  ++
Sbjct: 229 QFLYVSIVLALFLMVMTIVQKQIVFPRAAYAGSVTVVCVLLFLPFVIAIREELTFWNLER 288

Query: 363 LADAMPPIGVTVEKLPLEEPKSPTLPPSSSIGVEEKA-TTSFFANI 497
             D   P  VTVEK   EE K   LPP SS   EEK  ++SFFAN+
Sbjct: 289 QHD-NSPTEVTVEKPQEEESKPVALPPVSSTQEEEKPNSSSFFANV 333


>emb|CAN82898.1| hypothetical protein VITISV_026994 [Vitis vinifera]
          Length = 599

 Score =  159 bits (401), Expect = 3e-37
 Identities = 86/166 (51%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   GFTGLSGAFMTQIYLAVYGNDSKSLLLLIAWFPAALSVVFVYTIRSMKVVRRDNEVKVFY 182
           GF GL GA MTQ Y A+YG+DSK+L+L++ WFPAAL V+FVYTIR+MKVVR+ NEVK+FY
Sbjct: 169 GFVGLGGAIMTQFYFAIYGDDSKALILMVGWFPAALCVIFVYTIRTMKVVRQPNEVKMFY 228

Query: 183 KFLYVALAIASFSMVVTILQKQFAFTHGWYVASASXXXXXXXXXXXIGIKEEHFIWIEKK 362
           +FLYV++ +A F MV+TI+QKQ  F    Y  S +           I I+EE   W  ++
Sbjct: 229 QFLYVSIVLALFLMVMTIVQKQIVFPRAAYAGSVTVVCVLLFLPFVIAIREELTFWNLER 288

Query: 363 LADAMPPIGVTVEKLPLEEPKSPTLPPSSSIGVEEKA-TTSFFANI 497
             D   P  VTVEK   EE K   LPP SS   EEK  ++SFFAN+
Sbjct: 289 QHD-NSPTEVTVEKPQEEESKPVALPPVSSTQEEEKPNSSSFFANV 333


>emb|CAN61265.1| hypothetical protein VITISV_013572 [Vitis vinifera]
          Length = 492

 Score =  159 bits (401), Expect = 3e-37
 Identities = 86/166 (51%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   GFTGLSGAFMTQIYLAVYGNDSKSLLLLIAWFPAALSVVFVYTIRSMKVVRRDNEVKVFY 182
           GF GL GA MTQ Y A+YG+DSK+L+L++ WFPAAL V+FVYTIR+MKVVR+ NEVK+FY
Sbjct: 62  GFVGLGGAIMTQFYFAIYGDDSKALILMVGWFPAALCVIFVYTIRTMKVVRQPNEVKMFY 121

Query: 183 KFLYVALAIASFSMVVTILQKQFAFTHGWYVASASXXXXXXXXXXXIGIKEEHFIWIEKK 362
           +FLYV++ +A F MV+TI+QKQ  F    Y  S +           I I+EE   W  ++
Sbjct: 122 QFLYVSIVLALFLMVMTIVQKQIVFPRAAYAGSVTVVCVLLFLPFVIAIREELTFWNLER 181

Query: 363 LADAMPPIGVTVEKLPLEEPKSPTLPPSSSIGVEEKA-TTSFFANI 497
             D   P  VTVEK   EE K   LPP SS   EEK  ++SFFAN+
Sbjct: 182 QHD-NSPTEVTVEKPQEEESKPVALPPVSSTQEEEKPNSSSFFANV 226


>ref|XP_003632273.1| PREDICTED: uncharacterized protein LOC100244770 [Vitis vinifera]
          Length = 588

 Score =  158 bits (399), Expect = 5e-37
 Identities = 85/159 (53%), Positives = 107/159 (67%)
 Frame = +3

Query: 3   GFTGLSGAFMTQIYLAVYGNDSKSLLLLIAWFPAALSVVFVYTIRSMKVVRRDNEVKVFY 182
           GF GLSGA MTQIY AVYGNDSKSL+LLI WFPAA+SVVFV+TIR+MKVVR+ NE++VFY
Sbjct: 165 GFVGLSGAIMTQIYFAVYGNDSKSLILLIGWFPAAISVVFVFTIRTMKVVRQPNELRVFY 224

Query: 183 KFLYVALAIASFSMVVTILQKQFAFTHGWYVASASXXXXXXXXXXXIGIKEEHFIWIEKK 362
            FLYV++A+A F MV+TIL+KQ AF    Y  S +           I I++E   W ++K
Sbjct: 225 HFLYVSVALAVFLMVMTILEKQLAFPRAAYAGSVTVVCALLFLPLVIAIRQEFAPWNQQK 284

Query: 363 LADAMPPIGVTVEKLPLEEPKSPTLPPSSSIGVEEKATT 479
             D  P   +T+EK    E K   LPP+SS   E K+ +
Sbjct: 285 QQDDSPS-EITIEKPQAVESKLVALPPTSSPNREGKSNS 322


>ref|XP_002523712.1| conserved hypothetical protein [Ricinus communis]
           gi|223537016|gb|EEF38652.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 558

 Score =  139 bits (351), Expect = 2e-31
 Identities = 80/169 (47%), Positives = 102/169 (60%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   GFTGLSGAFMTQIYLAVYGNDSKSLLLLIAWFPAALSVVFVYTIRSMKVVRRDNEVKVFY 182
           GF GLSGA  TQ+YLA+YG DSKSL+LLIAW PAALSVVFVYTIR MK  R+ NE+KVFY
Sbjct: 152 GFVGLSGAIFTQLYLAIYGTDSKSLILLIAWLPAALSVVFVYTIRVMKPERQPNELKVFY 211

Query: 183 KFLYVALAIASFSMVVTILQKQFAFTHGWYVASASXXXXXXXXXXXIGIKEEHFIWIEKK 362
            FLYV++ +A F ++++IL+KQ  F+   Y ASA+           I +KEE   W  KK
Sbjct: 212 NFLYVSIVLALFLLLISILEKQINFSREAYAASATVACLFLFVPLLIAVKEEWIQWNLKK 271

Query: 363 LADAMPPIGVTVEKLPLEEPKSPTLPPSSSI----GVEEKATTSFFANI 497
                PP      +L +++PK  T      +      +EKA  S F  I
Sbjct: 272 EEAMKPP-----TELAIQKPKEVTALEQDEVVKPEVSKEKAERSCFLTI 315


Top