BLASTX nr result

ID: Coptis23_contig00034702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034702
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309529.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002336031.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002516533.1| serine-threonine protein kinase, plant-type,...   121   7e-26
ref|XP_002324752.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|NP_197965.1| Protein kinase family protein with leucine-rich...   110   9e-23

>ref|XP_002309529.1| predicted protein [Populus trichocarpa] gi|222855505|gb|EEE93052.1|
           predicted protein [Populus trichocarpa]
          Length = 1014

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
 Frame = -1

Query: 389 EDSFLNNTGLCGIN-LRN--NCISGLRSSKRLPARLLAMIIVLCGXXXXXXXXXXXXXFK 219
           ++SFLNN+ LC +N + N  NC + LR SK++P++ LA+I+ L                +
Sbjct: 600 DNSFLNNSNLCAVNPILNFPNCYAKLRDSKKMPSKTLALILALTVTIFLVTTIVTLFMVR 659

Query: 218 DYQRRKHVGDLSSYKLTSFQRLDFTESEILSNLTENNVIGSGGSGKVYRVDINRTRSCVA 39
           DYQR+K   DL+++KLTSFQRLDFTE+ +L++LTENN+IGSGGSGKVYRV INR    VA
Sbjct: 660 DYQRKKAKRDLAAWKLTSFQRLDFTEANVLASLTENNLIGSGGSGKVYRVAINRAGDYVA 719

Query: 38  VKKIWNKGKLD 6
           VK+IWN  K+D
Sbjct: 720 VKRIWNNEKMD 730


>ref|XP_002336031.1| predicted protein [Populus trichocarpa] gi|222838987|gb|EEE77338.1|
           predicted protein [Populus trichocarpa]
          Length = 1014

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
 Frame = -1

Query: 389 EDSFLNNTGLCGIN-LRN--NCISGLRSSKRLPARLLAMIIVLCGXXXXXXXXXXXXXFK 219
           ++SFLNN+ LC +N + N  NC + LR SK++P++ LA+I+ L                +
Sbjct: 600 DNSFLNNSNLCAVNPILNFPNCYAKLRDSKKMPSKTLALILALTVTIFLVTTIVTLFMVR 659

Query: 218 DYQRRKHVGDLSSYKLTSFQRLDFTESEILSNLTENNVIGSGGSGKVYRVDINRTRSCVA 39
           DYQR+K   DL+++KLTSFQRLDFTE+ +L++LTENN+IGSGGSGKVYRV INR    VA
Sbjct: 660 DYQRKKAKRDLAAWKLTSFQRLDFTEANVLASLTENNLIGSGGSGKVYRVAINRAGDYVA 719

Query: 38  VKKIWNKGKLD 6
           VK+IWN  K+D
Sbjct: 720 VKRIWNNEKMD 730


>ref|XP_002516533.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223544353|gb|EEF45874.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 1026

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/132 (46%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
 Frame = -1

Query: 389 EDSFLNNTGLCGINL---RNNCISGLRSSKRLPARLLAMIIVLCGXXXXXXXXXXXXXFK 219
           E+SFLNN+ LC +N      NC +  R+S +L ++ LAMI++                 +
Sbjct: 601 ENSFLNNSNLCAVNPILDLPNCYTRSRNSDKLSSKFLAMILIFTVTAFIITIVLTLFAVR 660

Query: 218 DYQRRKHVGDLSSYKLTSFQRLDFTESEILSNLTENNVIGSGGSGKVYRVDINRTRSCVA 39
           DY R+KH  +L+++KLTSFQR+DFT++ IL++LTE+N+IGSGGSGKVYRV +NR    VA
Sbjct: 661 DYLRKKHKRELAAWKLTSFQRVDFTQANILASLTESNLIGSGGSGKVYRVAVNRAGELVA 720

Query: 38  VKKIWNKGKLDQ 3
           VK+IW   + D+
Sbjct: 721 VKRIWTNRQFDE 732


>ref|XP_002324752.1| predicted protein [Populus trichocarpa] gi|222866186|gb|EEF03317.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/131 (47%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
 Frame = -1

Query: 389 EDSFLNNTGLCGINLRNN---CISGLRSSKRLPARLLAMIIVLCGXXXXXXXXXXXXXFK 219
           ++SFL N  LC +N   N   C + LR S++   ++L++I+VL                +
Sbjct: 593 DNSFLENYKLCAVNPILNLPDCHTKLRDSEKFSFKILSLILVLTVTIFLVTIIVTLFMVR 652

Query: 218 DYQRRKHVGDLSSYKLTSFQRLDFTESEILSNLTENNVIGSGGSGKVYRVDINRTRSCVA 39
           D  R K   DL+S+KLTSFQRLDFTE+ IL++LTENN+IGSGGSGKVYR+ INR    VA
Sbjct: 653 DCPRGKQKRDLASWKLTSFQRLDFTEANILASLTENNLIGSGGSGKVYRIAINRAGDFVA 712

Query: 38  VKKIWNKGKLD 6
           VK+IW+  ++D
Sbjct: 713 VKRIWSNEEMD 723


>ref|NP_197965.1| Protein kinase family protein with leucine-rich repeat domain
           [Arabidopsis thaliana]
           gi|5107831|gb|AAD40144.1|AF149413_25 contains similarity
           to protein kinase domains (Pfam F00069, Score=162.6,
           E=6.8e-45, N=1) and leucien rich repeats (Pfam PF00560,
           Score=210.7, E=2.2e-59, N=10) [Arabidopsis thaliana]
           gi|28393326|gb|AAO42089.1| putative receptor protein
           kinase [Arabidopsis thaliana]
           gi|224589685|gb|ACN59374.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332006119|gb|AED93502.1| Protein kinase family
           protein with leucine-rich repeat domain [Arabidopsis
           thaliana]
          Length = 1005

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
 Frame = -1

Query: 389 EDSFLNNTGLCGIN---LRNNCISGLRSSKRLPARLLAMIIVLCGXXXXXXXXXXXXXFK 219
           E SFLNN+ LC  N      +C    R S+  P ++LAMI+V+                +
Sbjct: 593 ERSFLNNSNLCADNPVLSLPDCRKQRRGSRGFPGKILAMILVIAVLLLTITLFVTFFVVR 652

Query: 218 DYQRRKHVGDLSSYKLTSFQRLDFTESEILSNLTENNVIGSGGSGKVYRVDINRTRSCVA 39
           DY R++    L ++KLTSF R+DF ES+I+SNL E+ VIGSGGSGKVY++ +  +  CVA
Sbjct: 653 DYTRKQRRRGLETWKLTSFHRVDFAESDIVSNLMEHYVIGSGGSGKVYKIFVESSGQCVA 712

Query: 38  VKKIWNKGKLDQ 3
           VK+IW+  KLDQ
Sbjct: 713 VKRIWDSKKLDQ 724


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