BLASTX nr result

ID: Coptis23_contig00034695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034695
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29820.3| unnamed protein product [Vitis vinifera]              242   3e-62
ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   242   3e-62
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   234   9e-60
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...   224   9e-57
ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775...   223   2e-56

>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  242 bits (617), Expect = 3e-62
 Identities = 124/171 (72%), Positives = 142/171 (83%), Gaps = 3/171 (1%)
 Frame = +2

Query: 11  PTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVKEMSSGLVRIALEC- 187
           P+LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LELA     LVKEMSSGLVRIALEC 
Sbjct: 110 PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVKEMSSGLVRIALECE 169

Query: 188 KIGT--RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQTVSTGAGVIPVDAK 361
           K+    RP+KLFQEP+WTMY NG+K GYAMSR CGE++ HVLSTVQ+VS GAGVIP D  
Sbjct: 170 KVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQSVSAGAGVIPTDDN 229

Query: 362 SKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 514
            K     E GE++YMR RFERVVG+RDSEAFYMMNPDG GGPELSIFLLRI
Sbjct: 230 RKSIVGVE-GEMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELSIFLLRI 279


>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  242 bits (617), Expect = 3e-62
 Identities = 124/171 (72%), Positives = 142/171 (83%), Gaps = 3/171 (1%)
 Frame = +2

Query: 11  PTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVKEMSSGLVRIALEC- 187
           P+LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LELA     LVKEMSSGLVRIALEC 
Sbjct: 93  PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVKEMSSGLVRIALECE 152

Query: 188 KIGT--RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQTVSTGAGVIPVDAK 361
           K+    RP+KLFQEP+WTMY NG+K GYAMSR CGE++ HVLSTVQ+VS GAGVIP D  
Sbjct: 153 KVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQSVSAGAGVIPTDDN 212

Query: 362 SKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 514
            K     E GE++YMR RFERVVG+RDSEAFYMMNPDG GGPELSIFLLRI
Sbjct: 213 RKSIVGVE-GEMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELSIFLLRI 262


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  234 bits (596), Expect = 9e-60
 Identities = 119/173 (68%), Positives = 140/173 (80%), Gaps = 6/173 (3%)
 Frame = +2

Query: 14  TLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVKEMSSGLVRIALEC-K 190
           +LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LELA     LVKEMSSGLVRIALEC K
Sbjct: 105 SLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAMSTSTLVKEMSSGLVRIALECDK 164

Query: 191 I-----GTRPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQTVSTGAGVIPVD 355
           +     GTR  KLF EP WTMY NG+K GYA+SR C E +WHVL+TVQ+VS GAGVIP+ 
Sbjct: 165 VQVPTNGTRSGKLFNEPTWTMYCNGRKCGYAVSRTCTELDWHVLNTVQSVSVGAGVIPMV 224

Query: 356 AKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 514
              +KN   E GE++YMR +FERVVG+RDSEAFYMMNP+G GGPELSIFLLRI
Sbjct: 225 EDGRKNAGSE-GELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELSIFLLRI 276


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  224 bits (570), Expect = 9e-57
 Identities = 116/175 (66%), Positives = 137/175 (78%), Gaps = 7/175 (4%)
 Frame = +2

Query: 11  PTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVKEMSSGLVRIALEC- 187
           P+LGRKVTGTLFG + GHV+F VQ+DP S+PV +LEL+     LVKEMSSGLVRIALEC 
Sbjct: 42  PSLGRKVTGTLFGNRHGHVSFAVQDDPGSEPVLLLELSISTAMLVKEMSSGLVRIALECE 101

Query: 188 -----KIGT-RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQTVSTGAGVIP 349
                ++ T RP KLF EP WTMY NG+K GYA+SR C   +W+VL TVQ+VS GAGVIP
Sbjct: 102 KVRAPQVQTGRPGKLFNEPTWTMYCNGRKCGYAVSRRCTYSDWYVLGTVQSVSVGAGVIP 161

Query: 350 VDAKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPDGKGGPELSIFLLRI 514
           V    +K+G  E GE++YMR +FERVVG+RDSEAFYMMNP+G GGPELSIFLLRI
Sbjct: 162 VVEDGRKSGGGE-GELLYMRAKFERVVGSRDSEAFYMMNPEGNGGPELSIFLLRI 215


>ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775417 [Glycine max]
          Length = 296

 Score =  223 bits (567), Expect = 2e-56
 Identities = 121/194 (62%), Positives = 139/194 (71%), Gaps = 23/194 (11%)
 Frame = +2

Query: 2   PSQ----PTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVKEMSSGLV 169
           PSQ    P+LGRKVTGTLFG+++GH++F VQ  PR+DPV +LELA     LVKEMSSGLV
Sbjct: 103 PSQLSVTPSLGRKVTGTLFGHRRGHISFAVQLHPRADPVLLLELAMSTSSLVKEMSSGLV 162

Query: 170 RIALE-----CKIGTRPM----------KLFQEPIWTMYFNGKKFGYAMSRACGEYEWHV 304
           RIALE         TR M          KLFQEP WTMY NG+  GYA+SR CG+ +WHV
Sbjct: 163 RIALESQKLSASTITRTMRSNSGRQQQCKLFQEPSWTMYCNGRNCGYAVSRTCGDLDWHV 222

Query: 305 LSTVQTVSTGAGVIPV----DAKSKKNGSWEGGEVMYMRGRFERVVGNRDSEAFYMMNPD 472
           LST+Q+VS GAGVIP+     A S   G    GE+MYMR RFERVVG+RDSEAFYM+NPD
Sbjct: 223 LSTIQSVSVGAGVIPLLEDGKAASAAAGGGSEGELMYMRARFERVVGSRDSEAFYMLNPD 282

Query: 473 GKGGPELSIFLLRI 514
           G GGPELSIFLLRI
Sbjct: 283 GNGGPELSIFLLRI 296


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