BLASTX nr result

ID: Coptis23_contig00034683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034683
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267...   111   6e-23
ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
emb|CBI25355.3| unnamed protein product [Vitis vinifera]               98   7e-19
ref|XP_002520882.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_004146473.1| PREDICTED: uncharacterized protein LOC101218...    88   7e-16

>ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267305 [Vitis vinifera]
          Length = 616

 Score =  111 bits (278), Expect = 6e-23
 Identities = 83/191 (43%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
 Frame = -1

Query: 531 RNSKQVHSIIEALVRSERFGNSNQG-RSAEXXXXXXXXXXXXXXNPENTHVPGTSQFGVF 355
           RNSKQVHSIIEALVRSE+  N + G + A               +PEN +V G +     
Sbjct: 279 RNSKQVHSIIEALVRSEQLENGHAGSKQASHSKSGTKEISDEKKDPENVNVLGKTPLYPS 338

Query: 354 TKPENTNI--------SSGNRQTKEYPL---SSSALISEHRGGCGNFENAERLFNNENSG 208
            +   T I           N Q +  P+    S +L SE +GG G+    ER      S 
Sbjct: 339 HEDGPTKIIPLNPSNNMPANLQIRGNPMLVNKSMSLSSEDKGGDGDSRMIERRLVARTSC 398

Query: 207 PPRLASDCGNEMLTLKLSSSITTASEN---MSNEDSANNASVSSLSIKAATVASQWLELL 37
                    +E+L LKLSSS T ASEN   +SN++  N  SV+SLS+KAATVASQWLELL
Sbjct: 399 ASSSTPTNEDEILALKLSSSQTKASENISSLSNDEPMNLNSVTSLSVKAATVASQWLELL 458

Query: 36  QQDIRGRLAAL 4
            QDI+GRLAAL
Sbjct: 459 HQDIKGRLAAL 469


>ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|222862361|gb|EEE99867.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 75/180 (41%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
 Frame = -1

Query: 531 RNSKQVHSIIEALVRSERFGNSNQGRSAEXXXXXXXXXXXXXXNPENTHVPGTSQFGVFT 352
           RN KQVHSIIEALVRSE+  N                        EN  +  +    +  
Sbjct: 285 RNKKQVHSIIEALVRSEKLENG---------CLESKQAYLKSGTKENNSMSDSGIHRLSF 335

Query: 351 KPENTNISS--GNRQTKEYPLSSSALISEHRGGCGNFENAERLFNNENSGPPRLASDCGN 178
              N + +S  G++QT+ YP+S+         G G+    + + ++ N      AS+  N
Sbjct: 336 SHGNGSSTSLFGSKQTRGYPISN---------GEGDSSMVD-MVHDRNFVSHSAASE--N 383

Query: 177 EMLTLKLSSSITTASENMS--NEDSANNASVSSLSIKAATVASQWLELLQQDIRGRLAAL 4
           + LTLKLSSS     E+ +  NE+SANNASVS LS+KAATV+SQWLELL QDIRGR+AAL
Sbjct: 384 DGLTLKLSSSTNALEESRTVLNEESANNASVSCLSVKAATVSSQWLELLHQDIRGRIAAL 443


>emb|CBI25355.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 77/183 (42%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
 Frame = -1

Query: 531 RNSKQVHSIIEALVRSERFGNSNQG-RSAEXXXXXXXXXXXXXXNPENTHVPGTSQFGVF 355
           RNSKQVHSIIEALVRSE+  N + G + A               +PEN          + 
Sbjct: 266 RNSKQVHSIIEALVRSEQLENGHAGSKQASHSKSGTKEISDEKKDPENI---------IP 316

Query: 354 TKPENTNISSGNRQTKEYPL---SSSALISEHRGGCGNFENAERLFNNENSGPPRLASDC 184
             P N      N Q +  P+    S +L SE +GG                         
Sbjct: 317 LNPSNN--MPANLQIRGNPMLVNKSMSLSSEDKGG------------------------- 349

Query: 183 GNEMLTLKLSSSITTASEN---MSNEDSANNASVSSLSIKAATVASQWLELLQQDIRGRL 13
            +E+L LKLSSS T ASEN   +SN++  N  SV+SLS+KAATVASQWLELL QDI+GRL
Sbjct: 350 DDEILALKLSSSQTKASENISSLSNDEPMNLNSVTSLSVKAATVASQWLELLHQDIKGRL 409

Query: 12  AAL 4
           AAL
Sbjct: 410 AAL 412


>ref|XP_002520882.1| conserved hypothetical protein [Ricinus communis]
           gi|223540013|gb|EEF41591.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 593

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 63/176 (35%), Positives = 86/176 (48%)
 Frame = -1

Query: 531 RNSKQVHSIIEALVRSERFGNSNQGRSAEXXXXXXXXXXXXXXNPENTHVPGTSQFGVFT 352
           RN KQVHSIIEALVRSE+  N +     E                 N    G  +     
Sbjct: 285 RNKKQVHSIIEALVRSEKVENGHVETKQETCVKTATKEI------SNMIDSGIHRLNFSQ 338

Query: 351 KPENTNISSGNRQTKEYPLSSSALISEHRGGCGNFENAERLFNNENSGPPRLASDCGNEM 172
               ++I SG++Q   Y +          GG G+F   +++    ++       D     
Sbjct: 339 GIGGSSILSGSKQIGGYHIL---------GGEGDFSMIDKVSGKNSASHSTHVLDGDTIA 389

Query: 171 LTLKLSSSITTASENMSNEDSANNASVSSLSIKAATVASQWLELLQQDIRGRLAAL 4
           L L  S+  +  S   SNE+S N  S+SSLS++AA+VASQWLELL QDI+GRL+AL
Sbjct: 390 LKLSTSTKASEESSTFSNEESTNGTSISSLSVRAASVASQWLELLHQDIKGRLSAL 445


>ref|XP_004146473.1| PREDICTED: uncharacterized protein LOC101218481 [Cucumis sativus]
          Length = 607

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 70/179 (39%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
 Frame = -1

Query: 531 RNSKQVHSIIEALVRSERFGNSNQGRSAEXXXXXXXXXXXXXXNPENTHVPGTSQFGVFT 352
           RN KQVHSIIEA+VRSE+  N    R A               + ENTH P  + +G   
Sbjct: 291 RNRKQVHSIIEAIVRSEKQENE---RIANKLEKRHAAKAGAKRDLENTHDPDINVYGSSQ 347

Query: 351 KPENTNISSGNRQTKEYPLSSSALISEHRGGCGNFENAERLFNNENSGPPRLASDCGNEM 172
              ++N  S  RQ +   L+ S +        G          N  S   +L +    E 
Sbjct: 348 GYGSSNNISAVRQKRGCSLTRSLITEAEVVDRGQIMLDRATGKNYAS---QLNTTNDKET 404

Query: 171 LTLKLSSSITTASEN---MSNEDSANNASVSSLSIKAATVASQWLELLQQDIRGRLAAL 4
           L L+LSSS    SEN   +SN++  N   +SSLS+KAATVASQWL+L+ QDI+GRL+AL
Sbjct: 405 LALELSSS-HAVSENACPVSNDEEENLTCISSLSLKAATVASQWLDLIHQDIKGRLSAL 462


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