BLASTX nr result

ID: Coptis23_contig00034682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034682
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25355.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267...   162   3e-38
emb|CAN61688.1| hypothetical protein VITISV_024205 [Vitis vinifera]   153   1e-35
ref|XP_003588458.1| hypothetical protein MTR_1g007460 [Medicago ...   142   3e-32
ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>emb|CBI25355.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
 Frame = +2

Query: 11  MDLDADEASNSADKNPFYPYKVPGCLKS-SAASECGSSTGPLEENDSYKVWNEMKRNGFL 187
           +DL++++  +S +++PFY YK    +KS    SEC SSTGPLEE D  KVW EMK+NGFL
Sbjct: 148 LDLNSEDVCSSVNQDPFYSYKKRDRVKSPDGVSECASSTGPLEEKDPMKVWKEMKQNGFL 207

Query: 188 SSAHGGIPVPAPRGRKKRSDPLKKKMELAKREQIHRFTKVAAPSGLLNGLNPGIINHVRN 367
           SS HGGIPVP  R RK + D +KKK+ELAKREQ+ RFTK+AAPSGLLN LNPGIINHVRN
Sbjct: 208 SSTHGGIPVPKQRARKNKQDVIKKKIELAKREQVDRFTKIAAPSGLLNELNPGIINHVRN 267


>ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267305 [Vitis vinifera]
          Length = 616

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
 Frame = +2

Query: 11  MDLDADEASNSADKNPFYPYKVPGCLKS-SAASECGSSTGPLEENDSYKVWNEMKRNGFL 187
           +DL++++  +S +++PFY YK    +KS    SEC SSTGPLEE D  KVW EMK+NGFL
Sbjct: 161 LDLNSEDVCSSVNQDPFYSYKKRDRVKSPDGVSECASSTGPLEEKDPMKVWKEMKQNGFL 220

Query: 188 SSAHGGIPVPAPRGRKKRSDPLKKKMELAKREQIHRFTKVAAPSGLLNGLNPGIINHVRN 367
           SS HGGIPVP  R RK + D +KKK+ELAKREQ+ RFTK+AAPSGLLN LNPGIINHVRN
Sbjct: 221 SSTHGGIPVPKQRARKNKQDVIKKKIELAKREQVDRFTKIAAPSGLLNELNPGIINHVRN 280


>emb|CAN61688.1| hypothetical protein VITISV_024205 [Vitis vinifera]
          Length = 757

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/108 (69%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
 Frame = +2

Query: 47  DKNPFYPYKVPGCLKS-SAASECGSSTGPLEENDSYKVWNEMKRNGFLSSAHGGIPVPAP 223
           +++PFY YK    +KS    SEC SSTGPLEE D  KVW EMK+NGFLSS HGGIPVP  
Sbjct: 348 NQDPFYSYKKRDRVKSPDGVSECASSTGPLEEKDPMKVWKEMKQNGFLSSTHGGIPVPKQ 407

Query: 224 RGRKKRSDPLKKKMELAKREQIHRFTKVAAPSGLLNGLNPGIINHVRN 367
           R RK + D +KKK+ELAKREQ+ RFTK+AAPSGLLN LNPGIINHVRN
Sbjct: 408 RARKNKQDVIKKKIELAKREQVDRFTKIAAPSGLLNELNPGIINHVRN 455


>ref|XP_003588458.1| hypothetical protein MTR_1g007460 [Medicago truncatula]
           gi|355477506|gb|AES58709.1| hypothetical protein
           MTR_1g007460 [Medicago truncatula]
          Length = 585

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/121 (59%), Positives = 91/121 (75%), Gaps = 2/121 (1%)
 Frame = +2

Query: 11  MDLDADEASNSADKNPFYPYKVPGCLKSSAASECGSSTGPLEENDSYKVWNEMKRNGFLS 190
           +DL+A++ + S +  P   +K  G  KS   SE GSS  P +E D  ++W EMKRNGF+S
Sbjct: 157 VDLNAEDDTRSVNVGPTNFHKEHGHFKSKDLSESGSSAEPPKERDPMRIWTEMKRNGFIS 216

Query: 191 SA--HGGIPVPAPRGRKKRSDPLKKKMELAKREQIHRFTKVAAPSGLLNGLNPGIINHVR 364
           ++  HGGIPVP  RGRK +S+ L++KMELAKREQI+RFTK+AAPSGLLN LNPGIINHVR
Sbjct: 217 TSTVHGGIPVPKKRGRKSKSEILEQKMELAKREQINRFTKIAAPSGLLNDLNPGIINHVR 276

Query: 365 N 367
           N
Sbjct: 277 N 277


>ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|222862361|gb|EEE99867.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  139 bits (349), Expect = 3e-31
 Identities = 74/133 (55%), Positives = 93/133 (69%), Gaps = 14/133 (10%)
 Frame = +2

Query: 11  MDLDADEASNSADKNPFYPYKVPGCLKSSAASECGSSTGPLEENDSYKVWNEMKRNGFLS 190
           +DL+A + S S ++ PF+  K     K+   SECGS+TGP++E D  ++W EMK+NGFLS
Sbjct: 157 LDLNAQDDS-SVNQEPFHTQKDHE--KTRDISECGSTTGPVQEKDPLRMWKEMKQNGFLS 213

Query: 191 SA--------------HGGIPVPAPRGRKKRSDPLKKKMELAKREQIHRFTKVAAPSGLL 328
           S+              HGGIP+   RGRK + D LK+KMELAKREQ+ RFTK+AAPSGLL
Sbjct: 214 SSYGGISIQSGFMTSSHGGIPMAKQRGRKPKDDVLKEKMELAKREQVDRFTKIAAPSGLL 273

Query: 329 NGLNPGIINHVRN 367
           NGLNPGIINHVRN
Sbjct: 274 NGLNPGIINHVRN 286


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