BLASTX nr result

ID: Coptis23_contig00034680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034680
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146729.1| PREDICTED: uncharacterized protein LOC101222...   144   1e-32
ref|XP_002315049.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002278425.1| PREDICTED: uncharacterized protein LOC100243...   140   8e-32
ref|XP_002312247.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002522445.1| conserved hypothetical protein [Ricinus comm...   139   3e-31

>ref|XP_004146729.1| PREDICTED: uncharacterized protein LOC101222659 [Cucumis sativus]
           gi|449525279|ref|XP_004169645.1| PREDICTED:
           uncharacterized protein LOC101228440 [Cucumis sativus]
          Length = 214

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/87 (78%), Positives = 76/87 (87%)
 Frame = +2

Query: 176 GGHKRRAVAKGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSGDGNCSPVNTMMIYVLIG 355
           GG KRRA+AKG+QKTLSKTSML NFLPTGTLLTF M+LPSVSG G C+ VNTMMI  L+G
Sbjct: 32  GGRKRRAMAKGMQKTLSKTSMLVNFLPTGTLLTFEMLLPSVSGKGECTHVNTMMINFLLG 91

Query: 356 LCSLSCFFFHFTDSFKDLEGKVYYGFV 436
           LC+LSCF FHFTDSFK ++GKVYYG V
Sbjct: 92  LCALSCFLFHFTDSFKGVDGKVYYGIV 118


>ref|XP_002315049.1| predicted protein [Populus trichocarpa] gi|222864089|gb|EEF01220.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = +2

Query: 158 TEDGKPGGHKRRAVAKGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSGDGNCSPVNTMM 337
           T+  K  G KRRAVAKG+QKT+SKTSML NFLPTGTLLTF M+LPS+S +G C+PV  +M
Sbjct: 47  TKAPKEPGSKRRAVAKGMQKTISKTSMLVNFLPTGTLLTFEMLLPSISKNGVCTPVTALM 106

Query: 338 IYVLIGLCSLSCFFFHFTDSFKDLEGKVYYGFV 436
           IY L+GLCSLSCFFFHFTDSFK  + K+YYGFV
Sbjct: 107 IYALLGLCSLSCFFFHFTDSFKGPDDKIYYGFV 139


>ref|XP_002278425.1| PREDICTED: uncharacterized protein LOC100243883 [Vitis vinifera]
          Length = 214

 Score =  140 bits (354), Expect = 8e-32
 Identities = 72/126 (57%), Positives = 85/126 (67%)
 Frame = +2

Query: 59  MDQSDGVGIKIYNTAXXXXXXXXXXXXXXXXXXTEDGKPGGHKRRAVAKGVQKTLSKTSM 238
           M+Q + +GIK+YN                           G KRRAVAKGVQKTLSKTSM
Sbjct: 1   MEQLEDLGIKVYNATPQEASPCPSSSPRLAPEP-------GRKRRAVAKGVQKTLSKTSM 53

Query: 239 LANFLPTGTLLTFSMVLPSVSGDGNCSPVNTMMIYVLIGLCSLSCFFFHFTDSFKDLEGK 418
           L NFLPTGTLLTF MVLPS+  +G CS V+ +MI++L+GLC LSCFFFHFTD F+  +GK
Sbjct: 54  LVNFLPTGTLLTFEMVLPSIYRNGECSSVSILMIHMLLGLCCLSCFFFHFTDGFRGPDGK 113

Query: 419 VYYGFV 436
           VYYGFV
Sbjct: 114 VYYGFV 119


>ref|XP_002312247.1| predicted protein [Populus trichocarpa] gi|222852067|gb|EEE89614.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/93 (69%), Positives = 79/93 (84%)
 Frame = +2

Query: 158 TEDGKPGGHKRRAVAKGVQKTLSKTSMLANFLPTGTLLTFSMVLPSVSGDGNCSPVNTMM 337
           T+  K  G+KRRAVAKG+QKT+SKTSML NFLPTGTLLTF M+LPS+S +G C+PV  +M
Sbjct: 47  TKAPKEPGNKRRAVAKGMQKTISKTSMLVNFLPTGTLLTFEMLLPSISRNGVCTPVTALM 106

Query: 338 IYVLIGLCSLSCFFFHFTDSFKDLEGKVYYGFV 436
           I+VL+GLCS+SCF FHFTDSFK  + K+YYGFV
Sbjct: 107 IHVLLGLCSVSCFLFHFTDSFKGPDDKIYYGFV 139


>ref|XP_002522445.1| conserved hypothetical protein [Ricinus communis]
           gi|223538330|gb|EEF39937.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/120 (58%), Positives = 86/120 (71%)
 Frame = +2

Query: 77  VGIKIYNTAXXXXXXXXXXXXXXXXXXTEDGKPGGHKRRAVAKGVQKTLSKTSMLANFLP 256
           +GIK+Y TA                  T+  K  G KR+A+AKGVQKTLSKTSML NFLP
Sbjct: 8   IGIKVY-TASPRNDDNPVITPFSSSSVTQAPKEPGRKRQAMAKGVQKTLSKTSMLVNFLP 66

Query: 257 TGTLLTFSMVLPSVSGDGNCSPVNTMMIYVLIGLCSLSCFFFHFTDSFKDLEGKVYYGFV 436
           TGTLLTF M+LPSV  +G C+ V+ +M+ +L+GLC++SCFFFHFTDSFK  +GKVYYGFV
Sbjct: 67  TGTLLTFEMILPSVIKNGECTHVSILMLLLLLGLCAVSCFFFHFTDSFKGPDGKVYYGFV 126


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