BLASTX nr result

ID: Coptis23_contig00034666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034666
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531408.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002531408.1| conserved hypothetical protein [Ricinus communis]
           gi|223529001|gb|EEF30992.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 162

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = +2

Query: 209 KAISSNTLLLNATSTQCKYVYPDPVPEFAQTESLKFRSELRKKLWTNKE-FGDDL 370
           K ISSNT+   AT +   YVY DP+PEFAQ+E+ KFR+E+ KKL  +K+ FG DL
Sbjct: 37  KPISSNTV--GATPSFQNYVYSDPIPEFAQSETEKFRAEILKKLSKDKQTFGGDL 89


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