BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034661
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   123   3e-26
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   123   3e-26
gb|EAZ28547.1| hypothetical protein OsJ_12529 [Oryza sativa Japo...   123   3e-26
gb|AAP13001.1| putative Sec63 domain containing protein [Oryza s...   123   3e-26
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   121   1e-25

>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
           truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
           ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  123 bits (309), Expect = 3e-26
 Identities = 74/147 (50%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
 Frame = -1

Query: 425 LPKGTEVSAFNGCETINVLPLLPEQLDLGEVQVKVSTMPCFAEPTFTGMSHLSAVPSKVY 246
           LP G+      G E I+V  L  + LD  E  +K+S MP +A+P F GM+ L+ V SKVY
Sbjct: 473 LPDGSYRHLEKGYEEIHVPALKAKPLDPNEKLLKISAMPDWAQPAFKGMTQLNRVQSKVY 532

Query: 245 RTALFTPCNILLCSPIGAGDTEVALLTILQQAV------DPSHITSGRKIVYLAPMQARV 84
            TALF P N+LLC+P GAG T VA+LTILQQ        D S   S  KIVY+APM+A V
Sbjct: 533 ETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNTDDGSIDHSAYKIVYVAPMKALV 592

Query: 83  AEVVLSLSIQLRDYNFLVKELNWNHTL 3
           AEVV +LS +L+DYN  V+EL+ + +L
Sbjct: 593 AEVVGNLSNRLQDYNVTVRELSGDQSL 619


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score =  123 bits (308), Expect = 3e-26
 Identities = 74/147 (50%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
 Frame = -1

Query: 425 LPKGTEVSAFNGCETINVLPLLPEQLDLGEVQVKVSTMPCFAEPTFTGMSHLSAVPSKVY 246
           LP G+      G E I+V  L  + LD  E  VK+S+MP +A+P F GM+ L+ V SKVY
Sbjct: 465 LPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISSMPDWAQPAFKGMTQLNRVQSKVY 524

Query: 245 RTALFTPCNILLCSPIGAGDTEVALLTILQQAV------DPSHITSGRKIVYLAPMQARV 84
            TALF P N+LLC+P GAG T VA+LTILQQ        D S   S  KIVY+APM+A V
Sbjct: 525 ETALFQPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPKDGSIDHSAYKIVYVAPMKALV 584

Query: 83  AEVVLSLSIQLRDYNFLVKELNWNHTL 3
           AEVV +LS +L+DY+  V+EL+ + +L
Sbjct: 585 AEVVGNLSNRLQDYDVKVRELSGDQSL 611


>gb|EAZ28547.1| hypothetical protein OsJ_12529 [Oryza sativa Japonica Group]
          Length = 2116

 Score =  123 bits (308), Expect = 3e-26
 Identities = 70/145 (48%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
 Frame = -1

Query: 425 LPKGTEVSAFNGCETINVLPLLPEQLDLGEVQVKVSTMPCFAEPTFTGMSHLSAVPSKVY 246
           LP G+  +  NG E ++V  L  +  + GE  VK+S MP +A+P F GM+ L+ + SKVY
Sbjct: 460 LPPGSFRTPHNGYEEVHVPALKAKPYENGEKVVKISDMPDWAQPAFAGMTQLNRIQSKVY 519

Query: 245 RTALFTPCNILLCSPIGAGDTEVALLTILQQ----AVDPSHITSGRKIVYLAPMQARVAE 78
            TALF P NI+LC+P GAG T VA+LTILQQ      D     +  KIVY+APM+A VAE
Sbjct: 520 DTALFKPDNIILCAPTGAGKTNVAVLTILQQIGLHMKDGEFDNTKYKIVYVAPMKALVAE 579

Query: 77  VVLSLSIQLRDYNFLVKELNWNHTL 3
           VV +LS +L++YN  V+EL+ +  L
Sbjct: 580 VVGNLSARLKEYNITVRELSGDQNL 604


>gb|AAP13001.1| putative Sec63 domain containing protein [Oryza sativa Japonica
           Group] gi|108711023|gb|ABF98818.1| U5 small nuclear
           ribonucleoprotein 200 kDa helicase, putative [Oryza
           sativa Japonica Group]
          Length = 2144

 Score =  123 bits (308), Expect = 3e-26
 Identities = 70/145 (48%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
 Frame = -1

Query: 425 LPKGTEVSAFNGCETINVLPLLPEQLDLGEVQVKVSTMPCFAEPTFTGMSHLSAVPSKVY 246
           LP G+  +  NG E ++V  L  +  + GE  VK+S MP +A+P F GM+ L+ + SKVY
Sbjct: 460 LPPGSFRTPHNGYEEVHVPALKAKPYENGEKVVKISDMPDWAQPAFAGMTQLNRIQSKVY 519

Query: 245 RTALFTPCNILLCSPIGAGDTEVALLTILQQ----AVDPSHITSGRKIVYLAPMQARVAE 78
            TALF P NI+LC+P GAG T VA+LTILQQ      D     +  KIVY+APM+A VAE
Sbjct: 520 DTALFKPDNIILCAPTGAGKTNVAVLTILQQIGLHMKDGEFDNTKYKIVYVAPMKALVAE 579

Query: 77  VVLSLSIQLRDYNFLVKELNWNHTL 3
           VV +LS +L++YN  V+EL+ +  L
Sbjct: 580 VVGNLSARLKEYNITVRELSGDQNL 604


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Glycine max]
          Length = 2183

 Score =  121 bits (304), Expect = 1e-25
 Identities = 73/147 (49%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
 Frame = -1

Query: 425 LPKGTEVSAFNGCETINVLPLLPEQLDLGEVQVKVSTMPCFAEPTFTGMSHLSAVPSKVY 246
           LP G+      G E I+V  L  + LD  E  VK+S+MP +A+P F GM+ L+ V SKVY
Sbjct: 465 LPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISSMPDWAQPAFKGMTQLNRVQSKVY 524

Query: 245 RTALFTPCNILLCSPIGAGDTEVALLTILQQAV------DPSHITSGRKIVYLAPMQARV 84
            TALF P N+LLC+P GAG T VA+LTILQQ        D S   S  KIVY+APM+A V
Sbjct: 525 ETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALV 584

Query: 83  AEVVLSLSIQLRDYNFLVKELNWNHTL 3
           AEVV +LS +L++Y+  V+EL+ + +L
Sbjct: 585 AEVVGNLSNRLQEYDVKVRELSGDQSL 611