BLASTX nr result

ID: Coptis23_contig00034657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034657
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546511.1| PREDICTED: protein LURP-one-related 6-like [...   107   1e-21
ref|XP_003534948.1| PREDICTED: protein LURP-one-related 6-like [...   106   2e-21
ref|XP_002278209.1| PREDICTED: protein LURP-one-related 6 [Vitis...   100   1e-19
ref|XP_003595297.1| hypothetical protein MTR_2g042230 [Medicago ...   100   2e-19
ref|XP_002326129.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19

>ref|XP_003546511.1| PREDICTED: protein LURP-one-related 6-like [Glycine max]
          Length = 211

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/73 (65%), Positives = 63/73 (86%)
 Frame = -3

Query: 292 VKGSFPDRACTIIDSEGNIVAQVGVNNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILD 113
           V+G FPDR+C+I+D  GN++AQVGVN ++E+++  KDLYHVVV+PG DQAFVFGVIAILD
Sbjct: 137 VRGYFPDRSCSIVDVRGNVIAQVGVNKEVEKLMESKDLYHVVVKPGIDQAFVFGVIAILD 196

Query: 112 NIHGETTVC*LQN 74
            I+GE+T C +QN
Sbjct: 197 YIYGESTYCRVQN 209


>ref|XP_003534948.1| PREDICTED: protein LURP-one-related 6-like [Glycine max]
          Length = 203

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/69 (68%), Positives = 61/69 (88%)
 Frame = -3

Query: 292 VKGSFPDRACTIIDSEGNIVAQVGVNNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILD 113
           V+G FPDR+C+I+D  GN++AQVGVN ++E+++  KDLYHVVV+PG DQAFVFGVIAILD
Sbjct: 135 VRGYFPDRSCSIVDVRGNVIAQVGVNKEVEKLMESKDLYHVVVKPGIDQAFVFGVIAILD 194

Query: 112 NIHGETTVC 86
           NI+GE+T C
Sbjct: 195 NIYGESTHC 203


>ref|XP_002278209.1| PREDICTED: protein LURP-one-related 6 [Vitis vinifera]
           gi|147777894|emb|CAN71378.1| hypothetical protein
           VITISV_001493 [Vitis vinifera]
           gi|297738553|emb|CBI27798.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/69 (65%), Positives = 58/69 (84%)
 Frame = -3

Query: 292 VKGSFPDRACTIIDSEGNIVAQVGVNNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILD 113
           + G FPDR C+I+DS+GNIVAQVGV  +++E +  KDLYHVV++PG DQAFVFGVIA+LD
Sbjct: 140 INGYFPDRDCSIVDSKGNIVAQVGVKKEVDEFMGSKDLYHVVIKPGIDQAFVFGVIAVLD 199

Query: 112 NIHGETTVC 86
            I+GE+T C
Sbjct: 200 YIYGESTRC 208


>ref|XP_003595297.1| hypothetical protein MTR_2g042230 [Medicago truncatula]
           gi|355484345|gb|AES65548.1| hypothetical protein
           MTR_2g042230 [Medicago truncatula]
           gi|388518905|gb|AFK47514.1| unknown [Medicago
           truncatula]
          Length = 206

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/69 (63%), Positives = 59/69 (85%)
 Frame = -3

Query: 292 VKGSFPDRACTIIDSEGNIVAQVGVNNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILD 113
           ++G FPD+ C+I+D+ GNIVAQVG+N ++E+++  KDLYHVVV+PG DQAFVFGVIA LD
Sbjct: 138 IRGYFPDKHCSIVDTRGNIVAQVGINKEVEKLMENKDLYHVVVKPGMDQAFVFGVIATLD 197

Query: 112 NIHGETTVC 86
            I+GE+T C
Sbjct: 198 YIYGESTYC 206


>ref|XP_002326129.1| predicted protein [Populus trichocarpa] gi|222833322|gb|EEE71799.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/69 (62%), Positives = 58/69 (84%)
 Frame = -3

Query: 292 VKGSFPDRACTIIDSEGNIVAQVGVNNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILD 113
           +KG FPDR+C+I+DS GNIVAQ+G+N + ++++  KDLYHVVV+PG DQ F FGVIA+LD
Sbjct: 142 IKGYFPDRSCSIVDSLGNIVAQIGINKEEDQLMANKDLYHVVVRPGIDQVFTFGVIAVLD 201

Query: 112 NIHGETTVC 86
            I+GE+T C
Sbjct: 202 YIYGESTRC 210


Top