BLASTX nr result

ID: Coptis23_contig00034655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034655
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313303.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002299944.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002282821.1| PREDICTED: transcription factor MYB46 [Vitis...    64   1e-08
gb|AAZ20436.1| MYB20 [Malus x domestica]                               59   3e-07
dbj|BAJ61452.1| R2R3-MYB transcription factor [Lupinus albus]          57   1e-06

>ref|XP_002313303.1| predicted protein [Populus trichocarpa] gi|222849711|gb|EEE87258.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -3

Query: 373 DIMNLCMDXXXXXXXSMQAMVMRNRFDPLPMLENKYDHMSSAAAGYFNISACMTQVGIGE 194
           D M LCMD       SMQ M+  NRFD   ML N+YD   + AA  F++S C+TQVG+G+
Sbjct: 160 DTMTLCMDSSSSSSISMQGMITSNRFDSFSMLNNRYD--VTGAASLFDMSTCLTQVGMGD 217

Query: 193 GFYGSH-GIIGSTGNIGVDQSELFIPSLESISIEENNVTKN 74
           GFYG H GI+ +    G+ +S+L +P LES S EENN   N
Sbjct: 218 GFYGDHYGILEANNKTGL-ESDLSLPPLESRSFEENNTVSN 257


>ref|XP_002299944.1| predicted protein [Populus trichocarpa] gi|222847202|gb|EEE84749.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = -3

Query: 373 DIMNLCMDXXXXXXXSMQAMVMRNRFDPLPMLENKYDHMSSAAAGYFNISACMTQVGIGE 194
           D+M LC D       SM  +V  N+FDP  +L N+YD   S AA  F++S C+TQVG+G+
Sbjct: 161 DVMTLCKDSSSSPSISMHGVVTGNQFDPFTVLSNRYD--VSGAASLFDMSTCLTQVGMGD 218

Query: 193 GFYGSH-GIIGSTGNIGVDQSELFIPSLESISIEENNVTKN 74
           GFYG H GI+     IG+ +S+L +P LES SIEENN   N
Sbjct: 219 GFYGDHYGILEGNNKIGL-ESDLSLPPLESRSIEENNAVSN 258


>ref|XP_002282821.1| PREDICTED: transcription factor MYB46 [Vitis vinifera]
           gi|297746322|emb|CBI16378.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
 Frame = -3

Query: 325 MQAMVMRNRF-DPLPMLENKYDHMSSAAAGYFNISACMTQVGI--GEGFYGSH-GIIGST 158
           +QAM   N+  +PLPMLE   D M+S  +G FN   CMTQVGI   EG YG H G++G  
Sbjct: 175 IQAMAALNQMIEPLPMLEPSVD-MTSVNSGCFNAPPCMTQVGILSAEGLYGDHVGLLGGG 233

Query: 157 GNIGVDQSELFIPSLESISIEE--NNVTKNTFQK 62
           G  G    E F P +ESIS+ E  N   +NTF +
Sbjct: 234 G--GCVVGEQFFPPVESISMGENGNKTLENTFDR 265


>gb|AAZ20436.1| MYB20 [Malus x domestica]
          Length = 343

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
 Frame = -3

Query: 325 MQAMVMRNRFDPLPMLENKYDHMS-SAAAGYFNISACMTQ--VGIGEG-----FYGSHGI 170
           MQ+ V+ + FDP P L+     ++   A GY+N + C+TQ  +G+G G     F G+ G 
Sbjct: 179 MQSAVLSHMFDPFPALDIDQGGLTLPGAGGYYNANPCITQREIGVGGGDDCYNFGGNGGF 238

Query: 169 IGSTGNIGVDQSELFIPSLESISIEENNVTKNT 71
                +IGV+  E+F+P LES+SIE+ N+   T
Sbjct: 239 GSGDVDIGVE-GEIFVPPLESVSIEDQNIKTET 270


>dbj|BAJ61452.1| R2R3-MYB transcription factor [Lupinus albus]
          Length = 256

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -3

Query: 373 DIMNLCMDXXXXXXXS-MQAMVMRNRFDPLPML--ENKYDHMSSAAAGYFNISACMTQVG 203
           D+M +CMD       S MQ+MV   +FDP   L   N YD M++ +AG+ +I  CM QVG
Sbjct: 88  DLMTMCMDSSTSTSSSSMQSMVFAEQFDPFSTLINNNHYD-MTTVSAGFPHIPPCMNQVG 146

Query: 202 IGEGFYGSHGIIGSTGNIGVDQSELFIPSLES-ISIEENN 86
             EG +G++G++     + + + +  +P LE   SIE N+
Sbjct: 147 NVEGHHGNYGVLELNNKMELLERDFSLPPLEGRRSIEGNS 186


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