BLASTX nr result

ID: Coptis23_contig00034649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034649
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634885.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...    58   7e-07
ref|XP_003634879.1| PREDICTED: myrcene synthase, chloroplastic-l...    57   1e-06
emb|CAN62729.1| hypothetical protein VITISV_003091 [Vitis vinifera]    57   2e-06
ref|XP_003634883.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...    57   2e-06
ref|XP_003634880.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...    57   2e-06

>ref|XP_003634885.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 594

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/46 (52%), Positives = 35/46 (76%)
 Frame = +3

Query: 24  CESVAVRRSASYQPSIWDFDTIQSLKSEYMGKMCESEAKKLKENVR 161
           CE + VRR+A+YQP+IWD+D +QSL+S+Y+G+   S   KLK  V+
Sbjct: 43  CEEIIVRRTANYQPTIWDYDYVQSLRSDYVGETYTSRLDKLKRYVK 88


>ref|XP_003634879.1| PREDICTED: myrcene synthase, chloroplastic-like, partial [Vitis
           vinifera]
          Length = 321

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = +3

Query: 21  TCESVAVRRSASYQPSIWDFDTIQSLKSEYMGKMCESEAKKLKENVR 161
           TCE + VRR+A+Y P IWD+D +QSL+S+Y+G++      KLK +V+
Sbjct: 43  TCEEIIVRRTANYHPPIWDYDYVQSLRSDYVGEIYTRRLDKLKRDVK 89


>emb|CAN62729.1| hypothetical protein VITISV_003091 [Vitis vinifera]
          Length = 606

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +3

Query: 21  TCESVAVRRSASYQPSIWDFDTIQSLKSEYMGKMCESEAKKLKENVR 161
           TCE + VRR+A+Y P IWD+D +QSL+S+Y+G++      KLK  V+
Sbjct: 38  TCEEIIVRRTANYHPPIWDYDYVQSLRSDYVGEIYTRRLDKLKREVK 84


>ref|XP_003634883.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 726

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +3

Query: 21  TCESVAVRRSASYQPSIWDFDTIQSLKSEYMGKMCESEAKKLKENVR 161
           TCE + VRR+A+Y P IWD+D +QSL+S+Y+G+       KLK +V+
Sbjct: 42  TCEEIIVRRTANYHPPIWDYDYVQSLRSDYVGETYTRRLDKLKRDVK 88


>ref|XP_003634880.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 582

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +3

Query: 21  TCESVAVRRSASYQPSIWDFDTIQSLKSEYMGKMCESEAKKLKENVR 161
           TCE + VRR+A+Y P IWD+D +QSL+S+Y+G+       KLK +V+
Sbjct: 45  TCEEIIVRRTANYHPPIWDYDYVQSLRSDYVGETYTRRLDKLKRDVK 91


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