BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034645
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...   132   2e-29
ref|XP_002522770.1| conserved hypothetical protein [Ricinus comm...   127   8e-28
gb|AAF79318.1|AC002304_11 F14J16.17 [Arabidopsis thaliana]            125   5e-27
ref|NP_564704.2| zinc ion binding protein [Arabidopsis thaliana]...   125   5e-27
ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26

>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/99 (59%), Positives = 71/99 (71%)
 Frame = +3

Query: 171 SGVVENSVPASTSSSISDHWTTTDGIEEKSFWECEICTLFNPSLAPVCEACGIERPKDVA 350
           S  V+ S  AS S S+  H   T   EE   WEC ICTL NP LAP+C+ C  E+PKDV 
Sbjct: 263 SSFVDLSKCASASGSVLGH-NATHNTEESIMWECGICTLLNPPLAPICKVCSTEKPKDVG 321

Query: 351 TKFKIWSCKHCTLENSVKLDKCTACGQWRYSYGPPVSSQ 467
            K+K+WSCK CTLEN+V+LDKC ACGQWRYS+GPPVS++
Sbjct: 322 IKYKVWSCKFCTLENNVELDKCGACGQWRYSHGPPVSTR 360


>ref|XP_002522770.1| conserved hypothetical protein [Ricinus communis]
           gi|223538008|gb|EEF39621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score =  127 bits (320), Expect = 8e-28
 Identities = 55/93 (59%), Positives = 68/93 (73%)
 Frame = +3

Query: 186 NSVPASTSSSISDHWTTTDGIEEKSFWECEICTLFNPSLAPVCEACGIERPKDVATKFKI 365
           N +  S+  SI++H   +   EE + WEC  CTL NP LAP+C  C  E+PKD + K+KI
Sbjct: 307 NLIGGSSLGSIANHEIHSS--EELAMWECAACTLLNPPLAPICNLCSTEKPKDASAKYKI 364

Query: 366 WSCKHCTLENSVKLDKCTACGQWRYSYGPPVSS 464
           WSCK CTLENSVKLDKC+AC +WRYSYGPPVS+
Sbjct: 365 WSCKFCTLENSVKLDKCSACSEWRYSYGPPVST 397


>gb|AAF79318.1|AC002304_11 F14J16.17 [Arabidopsis thaliana]
          Length = 450

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/119 (47%), Positives = 79/119 (66%)
 Frame = +3

Query: 108 SKKSRLAGNFAGRNTSNVGPKSGVVENSVPASTSSSISDHWTTTDGIEEKSFWECEICTL 287
           +K++R  G+  G + +   P +GV+++S+P  ++S     +      EE + WEC  CTL
Sbjct: 331 TKRNRSPGD-QGPSCAKDVPNAGVMKSSIPLPSTS-----YNANQSREESTMWECAECTL 384

Query: 288 FNPSLAPVCEACGIERPKDVATKFKIWSCKHCTLENSVKLDKCTACGQWRYSYGPPVSS 464
            NPSLAP+CE C   +PK+   K K+WSCK CTLEN VKL+KC ACGQWRYSYG P+S+
Sbjct: 385 LNPSLAPICELCTAAKPKEREMKHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLST 443


>ref|NP_564704.2| zinc ion binding protein [Arabidopsis thaliana]
           gi|110738098|dbj|BAF00982.1| hypothetical protein
           [Arabidopsis thaliana] gi|119935912|gb|ABM06032.1|
           At1g55915 [Arabidopsis thaliana]
           gi|332195198|gb|AEE33319.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 404

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/119 (47%), Positives = 79/119 (66%)
 Frame = +3

Query: 108 SKKSRLAGNFAGRNTSNVGPKSGVVENSVPASTSSSISDHWTTTDGIEEKSFWECEICTL 287
           +K++R  G+  G + +   P +GV+++S+P  ++S     +      EE + WEC  CTL
Sbjct: 285 TKRNRSPGD-QGPSCAKDVPNAGVMKSSIPLPSTS-----YNANQSREESTMWECAECTL 338

Query: 288 FNPSLAPVCEACGIERPKDVATKFKIWSCKHCTLENSVKLDKCTACGQWRYSYGPPVSS 464
            NPSLAP+CE C   +PK+   K K+WSCK CTLEN VKL+KC ACGQWRYSYG P+S+
Sbjct: 339 LNPSLAPICELCTAAKPKEREMKHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLST 397


>ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|222860422|gb|EEE97969.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/131 (45%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
 Frame = +3

Query: 96  DKVPSKKSRLAGNFAGRNTSNV-GPKSGV----VENSVPASTSSSISD--HWTTTDGIEE 254
           D  P   + + G+F    + ++ G  + +    V  + P ++ SS     +  T    E 
Sbjct: 252 DPFPDTTTHIEGSFIDLTSDSIFGSTTNLDTRHVLEAPPLTSDSSFGSICNRDTAHTPEA 311

Query: 255 KSFWECEICTLFNPSLAPVCEACGIERPKDVATKFKIWSCKHCTLENSVKLDKCTACGQW 434
            S WEC  CTL NP LAP+CE CG ++PKD +TK KIWSCK CTLEN +KLD+C ACGQW
Sbjct: 312 SSLWECGTCTLLNPQLAPICELCGAQKPKDASTKNKIWSCKFCTLENCLKLDRCLACGQW 371

Query: 435 RYSYGPPVSSQ 467
           RYS GPPVS++
Sbjct: 372 RYSNGPPVSTR 382