BLASTX nr result

ID: Coptis23_contig00034643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034643
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76041.1| hypothetical protein VITISV_002168 [Vitis vinifera]   192   5e-47
ref|XP_004137497.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   190   2e-46
gb|AFK35183.1| unknown [Lotus japonicus]                              187   9e-46
ref|XP_003634204.1| PREDICTED: probable FKBP-type peptidyl-proly...   187   2e-45
ref|XP_002318521.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45

>emb|CAN76041.1| hypothetical protein VITISV_002168 [Vitis vinifera]
          Length = 257

 Score =  192 bits (487), Expect = 5e-47
 Identities = 106/199 (53%), Positives = 125/199 (62%), Gaps = 4/199 (2%)
 Frame = +1

Query: 16  MASLFGSPTFLSHPIAKN-HVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVP 192
           MA+ FGSP F+ HP+ +  H                                      V 
Sbjct: 1   MAAFFGSPPFVYHPLTRTPHFSSSQTPPPPPPPTPPSQPQSPTPPLSITSSEPPAAASVK 60

Query: 193 ---VKPLKSTNTRTKADSTDWISSSLTRRXXXXXXXXXXXXXXIGVVSEQIKTRLEVSQE 363
               KP K     T ADSTDWI+S+LTRR              +GVVSEQIKTRLEVSQ+
Sbjct: 61  GQQQKPTKPATPVTTADSTDWIASTLTRRFGLGAGLAWAAFLALGVVSEQIKTRLEVSQQ 120

Query: 364 EANTREVEKEVEVLLPNGIRYYEIKVGGGATPRAGDLVVIDLYGKVEGNGEVFVNTFDGE 543
           EANTR+VEKE EV+LPNGIRYYE++VGGGA+PR GDLVVIDL G V+G+GEVFV+TFDGE
Sbjct: 121 EANTRDVEKEEEVVLPNGIRYYEMRVGGGASPRPGDLVVIDLKGSVQGSGEVFVDTFDGE 180

Query: 544 RRPLALVMGSRPYTKGMCK 600
           ++PLALVMGSRPYTKGMC+
Sbjct: 181 KKPLALVMGSRPYTKGMCE 199


>ref|XP_004137497.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2,
           chloroplastic-like [Cucumis sativus]
          Length = 252

 Score =  190 bits (482), Expect = 2e-46
 Identities = 104/195 (53%), Positives = 122/195 (62%)
 Frame = +1

Query: 16  MASLFGSPTFLSHPIAKNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPV 195
           MASLFGS +FLSHP+ + +                                       P 
Sbjct: 1   MASLFGSTSFLSHPLTRTYHLASSQTPSPSTPPSQPPQTPPSPSPSLSASSSEQLKPAPS 60

Query: 196 KPLKSTNTRTKADSTDWISSSLTRRXXXXXXXXXXXXXXIGVVSEQIKTRLEVSQEEANT 375
           K  +  +T T  DSTDWI+S+LTRR              +GVVSEQIKTRLEVSQEEANT
Sbjct: 61  KVEQQRST-TNVDSTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRLEVSQEEANT 119

Query: 376 REVEKEVEVLLPNGIRYYEIKVGGGATPRAGDLVVIDLYGKVEGNGEVFVNTFDGERRPL 555
           R VEKE EV+LPNGIRYYE++VGGGA PR GDLVVIDL GK++G  EVFV+TF  ER+PL
Sbjct: 120 RNVEKEEEVVLPNGIRYYELRVGGGAVPRTGDLVVIDLKGKIQGTDEVFVDTFGKERKPL 179

Query: 556 ALVMGSRPYTKGMCK 600
           ALVMGSRPY+KGMC+
Sbjct: 180 ALVMGSRPYSKGMCE 194


>gb|AFK35183.1| unknown [Lotus japonicus]
          Length = 250

 Score =  187 bits (476), Expect = 9e-46
 Identities = 92/137 (67%), Positives = 108/137 (78%)
 Frame = +1

Query: 190 PVKPLKSTNTRTKADSTDWISSSLTRRXXXXXXXXXXXXXXIGVVSEQIKTRLEVSQEEA 369
           P  P+K   + TK DSTDWI++SLTRR               GVVSEQIKTRLEVSQ+EA
Sbjct: 56  PQNPIKPVTSSTKVDSTDWIATSLTRRFGLGAGLAWVGFLAFGVVSEQIKTRLEVSQQEA 115

Query: 370 NTREVEKEVEVLLPNGIRYYEIKVGGGATPRAGDLVVIDLYGKVEGNGEVFVNTFDGERR 549
           NTR+VEKE EV LPNGIRY E+KVGGGA+PR GDLVVID+ GKVE  GEVFVNTF+G+++
Sbjct: 116 NTRDVEKEEEVTLPNGIRYCELKVGGGASPRPGDLVVIDIMGKVESTGEVFVNTFEGDKK 175

Query: 550 PLALVMGSRPYTKGMCK 600
           PLALVMGSRPY+KG+C+
Sbjct: 176 PLALVMGSRPYSKGVCE 192


>ref|XP_003634204.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           5, chloroplastic-like [Vitis vinifera]
           gi|297734309|emb|CBI15556.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  187 bits (474), Expect = 2e-45
 Identities = 106/202 (52%), Positives = 125/202 (61%), Gaps = 7/202 (3%)
 Frame = +1

Query: 16  MASLFGSPTFLSHPIAKN-HVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV- 189
           MA+ FGSP F+ HP+ +  H                                      V 
Sbjct: 1   MAAFFGSPPFVYHPLTRTPHFSSSQTPPPPPPPTPPSQPQSPTPPLSITSSEPPAAASVK 60

Query: 190 -----PVKPLKSTNTRTKADSTDWISSSLTRRXXXXXXXXXXXXXXIGVVSEQIKTRLEV 354
                P KP  +T   T ADSTDWI+S+LTRR               GVVSEQIKTRLEV
Sbjct: 61  GQQQKPTKP--ATTPVTTADSTDWIASTLTRRFGLGAGLAWAAFLAFGVVSEQIKTRLEV 118

Query: 355 SQEEANTREVEKEVEVLLPNGIRYYEIKVGGGATPRAGDLVVIDLYGKVEGNGEVFVNTF 534
           SQ+EANTR+VEKE EV+LPNGIRYYE++VGGGA+PR GDLVVIDL G V+G+GEVFV+TF
Sbjct: 119 SQQEANTRDVEKEEEVVLPNGIRYYEMRVGGGASPRPGDLVVIDLKGSVQGSGEVFVDTF 178

Query: 535 DGERRPLALVMGSRPYTKGMCK 600
           DGE++ LALVMGSRPYTKGMC+
Sbjct: 179 DGEKKSLALVMGSRPYTKGMCE 200


>ref|XP_002318521.1| predicted protein [Populus trichocarpa] gi|222859194|gb|EEE96741.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  186 bits (473), Expect = 2e-45
 Identities = 104/200 (52%), Positives = 126/200 (63%), Gaps = 5/200 (2%)
 Frame = +1

Query: 16  MASLFGSPTFLSHPIAK-NHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVP 192
           MA+ FGSP FLSHP+ + N                                       V 
Sbjct: 1   MATFFGSPPFLSHPLTRTNFSSSSQTPPPPTPPIPPSQPNPSPQLSSSSSEQPQLPASVR 60

Query: 193 V---KPLKST-NTRTKADSTDWISSSLTRRXXXXXXXXXXXXXXIGVVSEQIKTRLEVSQ 360
           V   KP K   N+ TK ++TDWI+S+LTRR              +GVVSEQIKTR+EVSQ
Sbjct: 61  VQQQKPAKPAGNSATKVETTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRIEVSQ 120

Query: 361 EEANTREVEKEVEVLLPNGIRYYEIKVGGGATPRAGDLVVIDLYGKVEGNGEVFVNTFDG 540
           +EANTR V KE EV LPNGIRYYE++VGGGA+P+ GDLVVIDL GK+EG+GEVFV+TF G
Sbjct: 121 QEANTRNVGKEEEVALPNGIRYYELRVGGGASPKTGDLVVIDLKGKIEGSGEVFVDTFGG 180

Query: 541 ERRPLALVMGSRPYTKGMCK 600
           +R+PLALVMGSRPY+KGMC+
Sbjct: 181 DRKPLALVMGSRPYSKGMCE 200


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