BLASTX nr result

ID: Coptis23_contig00034636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034636
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis v...   154   6e-37
ref|XP_002534553.1| calcium lipid binding protein, putative [Ric...   157   1e-36
ref|NP_001063800.1| Os09g0538800 [Oryza sativa Japonica Group] g...   155   3e-36
gb|EAZ09906.1| hypothetical protein OsI_32201 [Oryza sativa Indi...   155   3e-36

>ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|222850904|gb|EEE88451.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/100 (76%), Positives = 91/100 (91%)
 Frame = +3

Query: 3   EKVLVMEPVVRWAGNPNVIVLLKLPFLQMSVQLVDLQIFAAPRVILKPLVPTFPCFASIV 182
           EK LVMEP +RWAGNPN++++LKL  LQ++VQLVDLQIFAAPRV LKPLVPTFPCFA+I+
Sbjct: 138 EKDLVMEPAIRWAGNPNIVLVLKLMSLQVTVQLVDLQIFAAPRVALKPLVPTFPCFANIL 197

Query: 183 VSLMEKPHVDFGMKIFGADLMAIPGFYQYVQETIKKQVAS 302
           VSLME+PHVDFG+KI G D+M+IPG Y++VQE IKKQVAS
Sbjct: 198 VSLMERPHVDFGLKILGGDVMSIPGLYRFVQEMIKKQVAS 237


>ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis vinifera]
           gi|296086005|emb|CBI31446.3| unnamed protein product
           [Vitis vinifera]
          Length = 544

 Score =  154 bits (389), Expect(2) = 6e-37
 Identities = 72/100 (72%), Positives = 91/100 (91%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   EKVLVMEPVVRWAGNPNVIVLLK-LPFLQMSVQLVDLQIFAAPRVILKPLVPTFPCFASI 179
           EK L MEP ++WAGNPN+I++LK LPF ++++QLVDLQIFAAPR+ LKPLVPTFPCFAS+
Sbjct: 137 EKELAMEPAIKWAGNPNIILVLKWLPF-RITIQLVDLQIFAAPRITLKPLVPTFPCFASL 195

Query: 180 VVSLMEKPHVDFGMKIFGADLMAIPGFYQYVQETIKKQVA 299
           V+SLMEKPHVDFG+KI G D+M+IPG Y++VQETIK++VA
Sbjct: 196 VLSLMEKPHVDFGLKILGGDIMSIPGLYRFVQETIKREVA 235



 Score = 25.0 bits (53), Expect(2) = 6e-37
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 274 RKLLRSKLQVLYQWPQTLEI 333
           ++ ++ ++  LY WPQTLEI
Sbjct: 227 QETIKREVAKLYLWPQTLEI 246


>ref|XP_002534553.1| calcium lipid binding protein, putative [Ricinus communis]
           gi|223525050|gb|EEF27829.1| calcium lipid binding
           protein, putative [Ricinus communis]
          Length = 541

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/99 (72%), Positives = 88/99 (88%)
 Frame = +3

Query: 3   EKVLVMEPVVRWAGNPNVIVLLKLPFLQMSVQLVDLQIFAAPRVILKPLVPTFPCFASIV 182
           EK LVMEP ++WAGNPN+I+++KL  L + VQL+DLQIFAAPR+ LKPLVP+FPCFA+IV
Sbjct: 139 EKDLVMEPAIKWAGNPNIILMIKLMSLPVRVQLIDLQIFAAPRIALKPLVPSFPCFANIV 198

Query: 183 VSLMEKPHVDFGMKIFGADLMAIPGFYQYVQETIKKQVA 299
           VSLME+PHVDFG+K+ G DLM+IPG Y+ VQETIKKQVA
Sbjct: 199 VSLMERPHVDFGLKVLGGDLMSIPGLYRLVQETIKKQVA 237


>ref|NP_001063800.1| Os09g0538800 [Oryza sativa Japonica Group]
           gi|50726668|dbj|BAD34386.1| putative CLB1 protein [Oryza
           sativa Japonica Group] gi|52076051|dbj|BAD46564.1|
           putative CLB1 protein [Oryza sativa Japonica Group]
           gi|113632033|dbj|BAF25714.1| Os09g0538800 [Oryza sativa
           Japonica Group] gi|125606469|gb|EAZ45505.1| hypothetical
           protein OsJ_30162 [Oryza sativa Japonica Group]
           gi|215686768|dbj|BAG89618.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 539

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/100 (72%), Positives = 89/100 (89%)
 Frame = +3

Query: 3   EKVLVMEPVVRWAGNPNVIVLLKLPFLQMSVQLVDLQIFAAPRVILKPLVPTFPCFASIV 182
           E+ L+MEP ++WA NPNV V++K   L+ +VQ+VDLQ+FA+PR+ LKPLVPTFPCFA I+
Sbjct: 137 EQELIMEPSLKWAANPNVTVVVKAYGLKATVQIVDLQVFASPRITLKPLVPTFPCFAKIL 196

Query: 183 VSLMEKPHVDFGMKIFGADLMAIPGFYQYVQETIKKQVAS 302
           VSLMEKPHVDFG+K+FGADLMAIPG Y++VQETIKKQVAS
Sbjct: 197 VSLMEKPHVDFGLKLFGADLMAIPGLYRFVQETIKKQVAS 236


>gb|EAZ09906.1| hypothetical protein OsI_32201 [Oryza sativa Indica Group]
          Length = 539

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/100 (72%), Positives = 89/100 (89%)
 Frame = +3

Query: 3   EKVLVMEPVVRWAGNPNVIVLLKLPFLQMSVQLVDLQIFAAPRVILKPLVPTFPCFASIV 182
           E+ L+MEP ++WA NPNV V++K   L+ +VQ+VDLQ+FA+PR+ LKPLVPTFPCFA I+
Sbjct: 137 EQELIMEPSLKWAANPNVTVVVKAYGLKATVQIVDLQVFASPRITLKPLVPTFPCFAKIL 196

Query: 183 VSLMEKPHVDFGMKIFGADLMAIPGFYQYVQETIKKQVAS 302
           VSLMEKPHVDFG+K+FGADLMAIPG Y++VQETIKKQVAS
Sbjct: 197 VSLMEKPHVDFGLKLFGADLMAIPGLYRFVQETIKKQVAS 236


Top