BLASTX nr result

ID: Coptis23_contig00034635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034635
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40061.1| unknown [Medicago truncatula]                          243   2e-62
emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]     243   2e-62
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      241   3e-62
gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]   238   3e-61
gb|AFK39586.1| unknown [Medicago truncatula]                          238   4e-61

>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  243 bits (619), Expect = 2e-62
 Identities = 116/126 (92%), Positives = 120/126 (95%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 200
           GK VKL+PS  ELGA RF+MR+A TTKKV SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15  GKPVKLTPSSQELGAARFTMRKAATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 74

Query: 199 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 20
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 134

Query: 19  GSQIFS 2
           GSQIFS
Sbjct: 135 GSQIFS 140


>emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
          Length = 266

 Score =  243 bits (619), Expect = 2e-62
 Identities = 116/126 (92%), Positives = 120/126 (95%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 200
           GK VKLSPS  ELGA RF+MR++ TTKKV SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15  GKPVKLSPSSQELGASRFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 74

Query: 199 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 20
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 134

Query: 19  GSQIFS 2
           GSQIFS
Sbjct: 135 GSQIFS 140


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  241 bits (616), Expect = 3e-62
 Identities = 115/126 (91%), Positives = 120/126 (95%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 200
           GK VKL+PS  ELGA RF+MR++ TTKKV SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15  GKPVKLTPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 74

Query: 199 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 20
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 134

Query: 19  GSQIFS 2
           GSQIFS
Sbjct: 135 GSQIFS 140


>gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
          Length = 266

 Score =  238 bits (608), Expect = 3e-61
 Identities = 113/126 (89%), Positives = 118/126 (93%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 200
           GK VKL+PS  ELG  +F+MR+  TTKKV SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15  GKPVKLTPSSQELGVAKFTMRKGATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 74

Query: 199 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 20
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 134

Query: 19  GSQIFS 2
           GSQIFS
Sbjct: 135 GSQIFS 140


>gb|AFK39586.1| unknown [Medicago truncatula]
          Length = 265

 Score =  238 bits (607), Expect = 4e-61
 Identities = 111/125 (88%), Positives = 117/125 (93%)
 Frame = -3

Query: 376 GKAVKLSPSGAELGAGRFSMRRATTTKKVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 197
           GKA+KLSPS  ++G GR +MR+ATT K V SGSPWYGPDRVKYLGPFSGE PSYLTGEFP
Sbjct: 15  GKAIKLSPSTQDIGVGRVTMRKATTKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFP 74

Query: 196 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 17
           GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 75  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 134

Query: 16  SQIFS 2
           SQIFS
Sbjct: 135 SQIFS 139


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