BLASTX nr result

ID: Coptis23_contig00034634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034634
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC10911.1| pathogenesis-related protein [Zinnia elegans]         158   4e-37
emb|CAB71301.2| vegetative storage protein, VSP [Cichorium intybus]   135   3e-30
sp|O49065.1|RAP_TAROF RecName: Full=Root allergen protein; Short...   123   1e-26
gb|AEL17175.1| pathogen-related protein PR10 [Tanacetum cinerari...   119   3e-25
emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]   108   6e-22

>dbj|BAC10911.1| pathogenesis-related protein [Zinnia elegans]
          Length = 158

 Score =  158 bits (400), Expect = 4e-37
 Identities = 70/114 (61%), Positives = 93/114 (81%)
 Frame = +1

Query: 19  MTTVSIEIEHPSSFPADKVFKAFSDFENIAPKAIPQVFKSVKTIEGTGGPGTIRLFTFGD 198
           M +V++E+E  S  P +KVFK FSDF+NIAPK  PQVFKS++T+EG G  G+++LFTFGD
Sbjct: 1   MVSVTLEVEVSSQIPVEKVFKVFSDFDNIAPKVNPQVFKSIETVEGDGDVGSVKLFTFGD 60

Query: 199 AVPYKSGKQRVDLVDASTHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVF 360
           AVP+ SGK +VD +D S +SY++TFFEGD L G+L+S+ +HVK+ PSPNGGSVF
Sbjct: 61  AVPFTSGKCKVDAIDVSNYSYSYTFFEGDSLFGVLDSINNHVKVVPSPNGGSVF 114


>emb|CAB71301.2| vegetative storage protein, VSP [Cichorium intybus]
          Length = 158

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/114 (55%), Positives = 81/114 (71%)
 Frame = +1

Query: 19  MTTVSIEIEHPSSFPADKVFKAFSDFENIAPKAIPQVFKSVKTIEGTGGPGTIRLFTFGD 198
           M  V++EIE  SS PA K+FK FSDF+ +APK  P+ +K+V  IEG GG GTI+  T+GD
Sbjct: 1   MAVVTVEIEVSSSLPAAKLFKVFSDFDTLAPKVEPETYKAVNIIEGDGGVGTIKSITYGD 60

Query: 199 AVPYKSGKQRVDLVDASTHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVF 360
            VP+ S K +VD VD S  S  +T FEGDVL+GI+ES  HHVK  PS +GG+V+
Sbjct: 61  GVPFTSSKHKVDTVDTSNFSLTYTIFEGDVLMGIVESANHHVKFVPSADGGAVY 114


>sp|O49065.1|RAP_TAROF RecName: Full=Root allergen protein; Short=RAP
           gi|2707295|gb|AAB92255.1| root allergen protein
           [Taraxacum officinale]
          Length = 157

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
 Frame = +1

Query: 37  EIEHPSSFPADKVFKAFS-DFENIAPKAIPQVFKSVKTIEGTGGPGTIRLFTFGDAVPYK 213
           E E  SS     +FKAF  DF+ IAPKA P+ +KS+KTIEG GG GTI+  T+ D VP+ 
Sbjct: 5   EFEITSSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFT 64

Query: 214 SGKQRVDLVDASTHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVF 360
           S K +VD +D++  S ++T FEGDVL+GI+ES THH+K  PS +GGSV+
Sbjct: 65  SSKHKVDAIDSNNFSISYTIFEGDVLMGIIESGTHHLKFLPSADGGSVY 113


>gb|AEL17175.1| pathogen-related protein PR10 [Tanacetum cinerariifolium]
          Length = 157

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/114 (50%), Positives = 79/114 (69%)
 Frame = +1

Query: 19  MTTVSIEIEHPSSFPADKVFKAFSDFENIAPKAIPQVFKSVKTIEGTGGPGTIRLFTFGD 198
           M+ ++ E E  SS PADK+FK   DF+ +A K  PQ FKS+  I+G GG G+I+  T+GD
Sbjct: 1   MSVINREFEVRSSLPADKLFKLCLDFDTLAAKIEPQAFKSIDLIKGDGGVGSIKRTTYGD 60

Query: 199 AVPYKSGKQRVDLVDASTHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVF 360
           AVP+ S K ++D +DAS  S  +T FEGD L+G L+S THH K+ PS +GG+VF
Sbjct: 61  AVPFTSAKYKIDAIDASNFSGTYTVFEGDALMG-LDSATHHFKLVPSADGGAVF 113


>emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]
          Length = 159

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = +1

Query: 19  MTTVSIEIEHPSSFPADKVFKAFS-DFENIAPKAIPQVFKSVKTIEGTGGPGTIRLFTFG 195
           M  +S E E  SS P  K+FKAF  D +N+ PK +PQ  K V+ IEG GGPG+I+  TFG
Sbjct: 1   MGVISYEHEIISSIPPAKIFKAFILDSDNLIPKVLPQAIKCVEIIEGDGGPGSIKKITFG 60

Query: 196 DAVPYKSGKQRVDLVDASTHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSV 357
           +   +   K RVD +D    +Y+++  EGD L+G LES+++ VK+  SPNGGS+
Sbjct: 61  EGSQFNYVKHRVDGIDKENFTYSYSLIEGDALMGTLESISYEVKLVASPNGGSI 114


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