BLASTX nr result

ID: Coptis23_contig00034628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034628
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516820.1| 80 kD MCM3-associated protein, putative [Ric...   132   5e-29
emb|CBI26153.3| unnamed protein product [Vitis vinifera]              122   6e-26
ref|XP_002277304.1| PREDICTED: uncharacterized protein LOC100266...   122   6e-26
ref|XP_002315540.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-23
ref|XP_003547226.1| PREDICTED: uncharacterized protein LOC100777...   104   1e-20

>ref|XP_002516820.1| 80 kD MCM3-associated protein, putative [Ricinus communis]
           gi|223543908|gb|EEF45434.1| 80 kD MCM3-associated
           protein, putative [Ricinus communis]
          Length = 1646

 Score =  132 bits (333), Expect = 5e-29
 Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
 Frame = +2

Query: 110 ARRWPTEPSTFQAPKRTRSPPSPSANETIWKRSHSSQGDADRDEASPPRLGNSSNLLGSN 289
           AR    E +   APK+T   P   ANE + K +H  Q D+ R   SPPRLG  SN   S 
Sbjct: 273 ARNSQNEVADVNAPKQTGPLPISPANEVLQKNTHFLQNDSRRPSTSPPRLGPRSNARFSK 332

Query: 290 ATSTVPQRSSLFSPHNVTEGAGSKTLNSQVPKRNRSPSLPSAEQALPGTSYSTVADTERE 469
               +PQR+       V E A ++T N    KR RSP LP+A++ L G SYST   TERE
Sbjct: 333 YDYQIPQRTFSSDNDTVVEAAQTRTTNYSAAKRTRSPPLPAADKILNGNSYSTQDGTERE 392

Query: 470 TQAKAKRLARFGVELSQPVQKNIDHVKNKLPANRHEEALVERRKVVTDQPVEPGGDF--- 640
            QAKAKRLARF  EL++  +   D    K  A+R E + VER+K      +E  GDF   
Sbjct: 393 VQAKAKRLARFKKELNESFETRADIPGQKASASRRELSTVERQKFAGSHSMESTGDFTNV 452

Query: 641 -MLSDYEGPESSS 676
            + +D++G E+SS
Sbjct: 453 NLPADFDGLETSS 465


>emb|CBI26153.3| unnamed protein product [Vitis vinifera]
          Length = 1213

 Score =  122 bits (306), Expect = 6e-26
 Identities = 78/196 (39%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
 Frame = +2

Query: 101 FGEARRWPTEPSTFQAPKRTRSPPSPSANETIWKRSHSSQGDADRDEASPPRLGNSSNLL 280
           +   R  PT+ +  Q PKRTRSPP   ANE      H +Q ++ R   SPPR G SS  +
Sbjct: 185 YDSRRSSPTKITDAQVPKRTRSPPILPANEVFQGNIHLAQNNSKRPSISPPRFGGSS--V 242

Query: 281 GSNATSTVPQRSSLFSPHNVTEGAGSKTLNSQVPKRNRSPSLPSAEQALPGTSYSTVADT 460
            +   S + ++S         E A +K  +     R RSP L S +    G S+ST  DT
Sbjct: 243 HAPPASQILKKSPPSMLSIDAEAAATKPTSIS---RTRSPPLHSNDHVFQGNSFSTQDDT 299

Query: 461 ERETQAKAKRLARFGVELSQPVQKNIDHVKNKLPANRHEEALVERRKVVTDQPVEPGGDF 640
           ERE QAKAKRLARF VEL QPVQ + D    K+ ANRH+ ++VE++++  +  V+    F
Sbjct: 300 EREMQAKAKRLARFKVELEQPVQSSFDIANQKISANRHDLSMVEKQQLAGEHSVDVARSF 359

Query: 641 ----MLSDYEGPESSS 676
                L+D+EG E  S
Sbjct: 360 PDGNALADHEGLEPPS 375


>ref|XP_002277304.1| PREDICTED: uncharacterized protein LOC100266559 [Vitis vinifera]
          Length = 1557

 Score =  122 bits (306), Expect = 6e-26
 Identities = 78/196 (39%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
 Frame = +2

Query: 101 FGEARRWPTEPSTFQAPKRTRSPPSPSANETIWKRSHSSQGDADRDEASPPRLGNSSNLL 280
           +   R  PT+ +  Q PKRTRSPP   ANE      H +Q ++ R   SPPR G SS  +
Sbjct: 185 YDSRRSSPTKITDAQVPKRTRSPPILPANEVFQGNIHLAQNNSKRPSISPPRFGGSS--V 242

Query: 281 GSNATSTVPQRSSLFSPHNVTEGAGSKTLNSQVPKRNRSPSLPSAEQALPGTSYSTVADT 460
            +   S + ++S         E A +K  +     R RSP L S +    G S+ST  DT
Sbjct: 243 HAPPASQILKKSPPSMLSIDAEAAATKPTSIS---RTRSPPLHSNDHVFQGNSFSTQDDT 299

Query: 461 ERETQAKAKRLARFGVELSQPVQKNIDHVKNKLPANRHEEALVERRKVVTDQPVEPGGDF 640
           ERE QAKAKRLARF VEL QPVQ + D    K+ ANRH+ ++VE++++  +  V+    F
Sbjct: 300 EREMQAKAKRLARFKVELEQPVQSSFDIANQKISANRHDLSMVEKQQLAGEHSVDVARSF 359

Query: 641 ----MLSDYEGPESSS 676
                L+D+EG E  S
Sbjct: 360 PDGNALADHEGLEPPS 375


>ref|XP_002315540.1| predicted protein [Populus trichocarpa] gi|222864580|gb|EEF01711.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  112 bits (281), Expect = 5e-23
 Identities = 73/197 (37%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
 Frame = +2

Query: 95  HQFGEARRWPTEPSTFQAPKRTRSPPSPSANETIWKRSHSSQGDADRDEASPPRLGNSSN 274
           HQ      +     +  A KRTRSPP   A E     +   Q +  R   SPPRLG  SN
Sbjct: 268 HQDPSVLSYAGSHDSIHASKRTRSPPVSPATEVPHNNNLPVQKEYKRTSVSPPRLGGRSN 327

Query: 275 LLGSNATSTVPQRSSLFSPHNVT-EGAGSKTLNSQVPKRNRSPSLPSAEQALPGTSYSTV 451
            + S + S +PQR+  F   N T + A +KT +  + KR RSP    +++     SYST 
Sbjct: 328 AIFSTSNSQIPQRN--FPSVNATVDAAPTKTTSFAMSKRTRSPPFSLSDKVSMENSYSTQ 385

Query: 452 ADTERETQAKAKRLARFGVELSQPVQKNIDHVKNKLPANRHEEALVERRKVVTDQPVEPG 631
            D ERE QAKAKRLARF  ELS   + + D    K+ A+  E+A+V R+    D  +E  
Sbjct: 386 DDAEREIQAKAKRLARFKAELSDDFENSRDAADQKISASGREQAVVGRQNFYCDHSIESA 445

Query: 632 GDFMLS----DYEGPES 670
           GD   S    +++G E+
Sbjct: 446 GDLSNSNISPEFDGSET 462


>ref|XP_003547226.1| PREDICTED: uncharacterized protein LOC100777150 [Glycine max]
          Length = 1556

 Score =  104 bits (260), Expect = 1e-20
 Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 5/186 (2%)
 Frame = +2

Query: 134 STFQAPKRTRSPPSPSANETIWKRSHSSQGDADRDEASPPRLGNSSNLLGSNATSTVPQR 313
           S F  P+RTRSPP   A+     RS       ++   SPPRLG++SN+  +   S + Q+
Sbjct: 231 SRFPNPERTRSPPISYADVEAL-RSSDQTVLRNKPSLSPPRLGSTSNVPRTVPHSQIHQK 289

Query: 314 SSLFSPHNVTEGAGSKTLNSQVPKRNRSPSLPS--AEQALPGTSYSTVADTERETQAKAK 487
           S L    NV+E   SK ++S  PKR+RSP  PS  A + L G S S+  ++ERE  AKAK
Sbjct: 290 SFL---SNVSEATVSKPISSTAPKRSRSPP-PSFAANETLEGNSISSEDNSEREMLAKAK 345

Query: 488 RLARFGVELSQPVQKNIDHVKNKLPANRHEEALVERRKV---VTDQPVEPGGDFMLSDYE 658
           RLARF VELS+  Q N D    K  ANRHE++++E++ +   + D          +SD E
Sbjct: 346 RLARFKVELSKSEQNNDDIPNQKAFANRHEQSVLEQKYMRGNLMDSASNFTNGLAISDNE 405

Query: 659 GPESSS 676
           G E+S+
Sbjct: 406 GLETSN 411


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