BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034617
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 62   4e-08
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    62   5e-08
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...    60   2e-07
gb|ABK28140.1| unknown [Arabidopsis thaliana]                          60   2e-07

>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   LASRENSLWGNWVWTHSIKNKHF*TMKAPKDC-SWVWRGILEHRKTAMKFTRNIIANGDD 179
           L SR++SLW NWVWT+ I+   F +        SW+W+ +L++R  A    +  I +G  
Sbjct: 467 LVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSS 526

Query: 180 TFIWHDLWCTEPPLLWDNNARQMLQLG 260
           T  W+D W     L+   NAR+ + +G
Sbjct: 527 TSFWYDNWSQLGQLVDVTNARRTIDMG 553


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = +3

Query: 15  ENSLWGNWVWTHSIKNKHF*TMKAPKDCSWVWRGILEHRKTAMKFTRNIIANGDDTFIWH 194
           + S+W  W+ ++ ++ ++F T+K P++CSW W  IL+ R  A    + II +G  T +W 
Sbjct: 186 DGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWF 245

Query: 195 DLWCTEPPLLWDNNARQMLQLG--EEAKVSELI 287
           D W    PL      R +   G  + AKV+ LI
Sbjct: 246 DNWHPHSPLADSYGERFIYDSGMAKNAKVNVLI 278


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3    LASRENSLWGNWVWTHSIKNKHF*TMKAPKDC-SWVWRGILEHRKTAMKFTRNIIANGDD 179
            L SR++SLW NWVWT+ I+   F +        SW+W+ +L +R  A    +  I +G  
Sbjct: 1036 LVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIKSGSS 1095

Query: 180  TFIWHDLWCTEPPLLWDNNARQMLQLG 260
            T  W+D W     L+   NAR+ + +G
Sbjct: 1096 TSFWYDNWSQLRQLVDVTNARRTIDMG 1122


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   LASRENSLWGNWVWTHSIKNKHF*TMKAPK-DCSWVWRGILEHRKTAMKFTRNIIANGDD 179
           L + + SLWG WV T+ I+  +F  +KA     SW+WR +L  R  A  F +  I NG +
Sbjct: 118 LLASQTSLWGQWVQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHKKEIHNGRN 177

Query: 180 TFIWHDLWCTEPPLLWDNNARQMLQLG 260
           T  W+D W +   L+    AR  + LG
Sbjct: 178 TSFWYDHWSSMGTLVDVLGARGCIDLG 204


>gb|ABK28140.1| unknown [Arabidopsis thaliana]
          Length = 349

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   LASRENSLWGNWVWTHSIKNKHF*TMKAPK-DCSWVWRGILEHRKTAMKFTRNIIANGDD 179
           L + + SLWG WV T+ I+  +F  +KA     SW+WR +L  R  A  F +  I NG +
Sbjct: 118 LLASQTSLWGQWVQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHKKEIHNGRN 177

Query: 180 TFIWHDLWCTEPPLLWDNNARQMLQLG 260
           T  W+D W +   L+    AR  + LG
Sbjct: 178 TSFWYDHWSSMGTLVDVLGARGCIDLG 204