BLASTX nr result

ID: Coptis23_contig00034602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034602
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   177   1e-42
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   170   1e-40
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   169   2e-40
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   168   4e-40
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   166   1e-39

>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/127 (63%), Positives = 102/127 (80%)
 Frame = -1

Query: 382  LGIKIVYNSDGITLS*SHYVEKMLKRFNQFDCVPVRTPYDPSIHLTKNTGLGVSPLEFSR 203
            LGIK+   SDG+ LS  HY+EK+L++F ++D  P +TP D ++HL KNTG+G S LE+S 
Sbjct: 1036 LGIKVSKTSDGLILSQPHYIEKILEKFKKYDIRPKKTPMDVNLHLFKNTGIGKSQLEYSH 1095

Query: 202  VIGSLMYLMNCTRPDIAYAVSKLSRYTINPSNEHWDALIRVLRYLKYTSNYGVHYGRYPA 23
            +IGSLMY+MNCTR DIAY+VSKLSR+T NP   HW ++IRVL YLKYT NYG+H+ RYPA
Sbjct: 1096 IIGSLMYVMNCTRLDIAYSVSKLSRFTSNPGENHWKSIIRVLGYLKYTQNYGLHFTRYPA 1155

Query: 22   VLEGYSD 2
            VLEGYSD
Sbjct: 1156 VLEGYSD 1162


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/127 (62%), Positives = 98/127 (77%)
 Frame = -1

Query: 382  LGIKIVYNSDGITLS*SHYVEKMLKRFNQFDCVPVRTPYDPSIHLTKNTGLGVSPLEFSR 203
            LGIKI   S G+ LS  HY+EK+LKRFNQ+D  P++TP D ++H TKN G  +  LE+SR
Sbjct: 661  LGIKIAKTSSGLILSQCHYIEKILKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSR 720

Query: 202  VIGSLMYLMNCTRPDIAYAVSKLSRYTINPSNEHWDALIRVLRYLKYTSNYGVHYGRYPA 23
            +IGSLMY+MNC   DIAYAV+KLSR+T N   +HW  L+RVLRYL+YT NYG+HY RYP 
Sbjct: 721  IIGSLMYVMNCMCLDIAYAVNKLSRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPT 780

Query: 22   VLEGYSD 2
            +LEGYSD
Sbjct: 781  LLEGYSD 787


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/127 (62%), Positives = 102/127 (80%)
 Frame = -1

Query: 382  LGIKIVYNSDGITLS*SHYVEKMLKRFNQFDCVPVRTPYDPSIHLTKNTGLGVSPLEFSR 203
            LGIKI   S+ + LS SHYV+K+L +F++ +    RTP D ++HL+KN G  VS +E+SR
Sbjct: 998  LGIKIKRTSBELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSR 1057

Query: 202  VIGSLMYLMNCTRPDIAYAVSKLSRYTINPSNEHWDALIRVLRYLKYTSNYGVHYGRYPA 23
            +IGSLMYLM+CTRPDIAYAVSKLSRYT NP  +HW  +IRVL+YL++T +YG+HY RYPA
Sbjct: 1058 IIGSLMYLMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPA 1117

Query: 22   VLEGYSD 2
            VLEGYSD
Sbjct: 1118 VLEGYSD 1124


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/127 (63%), Positives = 101/127 (79%)
 Frame = -1

Query: 382  LGIKIVYNSDGITLS*SHYVEKMLKRFNQFDCVPVRTPYDPSIHLTKNTGLGVSPLEFSR 203
            LGIKI   SD + LS SHYV+K+L +F++ +    RTP D ++HL+ N G  VS +E+SR
Sbjct: 791  LGIKIKRTSDELILSQSHYVDKILGKFDKDNSGVARTPMDVTLHLSNNKGESVSQVEYSR 850

Query: 202  VIGSLMYLMNCTRPDIAYAVSKLSRYTINPSNEHWDALIRVLRYLKYTSNYGVHYGRYPA 23
            VIGSLMYLM+CTRPDIAYAVSKLSRYT NP  +HW  +IRVL+YL++T +YG+HY RYPA
Sbjct: 851  VIGSLMYLMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPA 910

Query: 22   VLEGYSD 2
            VLEGYSD
Sbjct: 911  VLEGYSD 917


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  166 bits (421), Expect = 1e-39
 Identities = 79/127 (62%), Positives = 101/127 (79%)
 Frame = -1

Query: 382  LGIKIVYNSDGITLS*SHYVEKMLKRFNQFDCVPVRTPYDPSIHLTKNTGLGVSPLEFSR 203
            LGIKI   S+ + LS SHYV+K+L +F++ +    RTP D ++HL+KN G  VS +E+SR
Sbjct: 831  LGIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSR 890

Query: 202  VIGSLMYLMNCTRPDIAYAVSKLSRYTINPSNEHWDALIRVLRYLKYTSNYGVHYGRYPA 23
            +IGSLMYLM+CTRPDIAYAV KLSRYT NP  +HW  +IRVL+YL++T +YG+HY RYPA
Sbjct: 891  IIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPA 950

Query: 22   VLEGYSD 2
            VLEGYSD
Sbjct: 951  VLEGYSD 957


Top