BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034587
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]   327   2e-87
gb|ABA93730.1| retrotransposon protein, putative, unclassified [...   325   7e-87
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...   325   9e-87
emb|CAA36616.1| unnamed protein product [Solanum tuberosum]           323   3e-86
gb|ABA95797.1| retrotransposon protein, putative, unclassified [...   322   6e-86

>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score =  327 bits (839), Expect = 2e-87
 Identities = 165/298 (55%), Positives = 209/298 (70%)
 Frame = +3

Query: 3    KVCRLLKSIYGLKQSPRAWFQLFSFVILSMGFARCQSDHTCFIHRSVSGFRTIVLVYVDD 182
            KVC+L KS+YGLKQSPRAWF+ F+  + + G+ + QSDHT FI  S  G   I++VYVDD
Sbjct: 1132 KVCKLKKSLYGLKQSPRAWFERFTQFVKNQGYVQAQSDHTMFIKHSNDGKIAILIVYVDD 1191

Query: 183  IIITGDDTLYIAKVKANLGTTFDIKDLGPMRYFLGIEVARSRHGISLSQRKYTLDLLHDT 362
            II+TGD    + ++K +L   F+IKDLG +RYFLG+EVARS+ GI +SQRKY LDLL +T
Sbjct: 1192 IILTGDHVTEMDRLKKSLALEFEIKDLGSLRYFLGMEVARSKRGIVVSQRKYILDLLKET 1251

Query: 363  GMLGCRPSQTPMDPNHRLHAEVGDLLPDPSHYQRLVGRLIYLTNTRPDIAFVVSTVSQFM 542
            GM GCRP+ TP+DPN +L       L + + YQ+LVG+LIYL++TRPDIAF VS VSQFM
Sbjct: 1252 GMSGCRPADTPIDPNQKLGDTNDGNLVNTTRYQKLVGKLIYLSHTRPDIAFAVSIVSQFM 1311

Query: 543  HSPRTTHMDAVNRILRYLKSAPGLGLFYPVGGSPDLVSYSDADYAGSLSDHRSTSGLCTF 722
            HSP   H++AV RILRYLKS PG GLF+       + +Y+DAD+AGS++D RSTSG CT+
Sbjct: 1312 HSPYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTDADWAGSVTDRRSTSGYCTY 1371

Query: 723  YGGCLIXXXXXXXXXXXXXXAEVEYRAMAHGACEILWLRSLLIELGFPPSEGSPLHCD 896
              G L+              AE EYRAMAHG CEILWL+ +L EL  P      L+CD
Sbjct: 1372 IWGNLVTWRSKKQSVXARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCD 1429


>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 656

 Score =  325 bits (834), Expect = 7e-87
 Identities = 169/299 (56%), Positives = 206/299 (68%), Gaps = 1/299 (0%)
 Frame = +3

Query: 3    KVCRLLKSIYGLKQSPRAWFQLFSFVILSMGFARCQSDHTCFI-HRSVSGFRTIVLVYVD 179
            KVC+L KS+YGLKQSPRAWF  F   +  MG+++C  DHT F  HR  +   TI+ VYVD
Sbjct: 285  KVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHTVFYKHRGTN--ITILAVYVD 342

Query: 180  DIIITGDDTLYIAKVKANLGTTFDIKDLGPMRYFLGIEVARSRHGISLSQRKYTLDLLHD 359
            DI+ITGDD   I  +K  LG  F++KDLGP+RYFLGIE+ARS  GI LSQRKY LDLL D
Sbjct: 343  DIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTD 402

Query: 360  TGMLGCRPSQTPMDPNHRLHAEVGDLLPDPSHYQRLVGRLIYLTNTRPDIAFVVSTVSQF 539
            TGMLGCR S TP+D NH+L A+ GD + +   YQRLVGRLIYL +TRPDI++VVS VS++
Sbjct: 403  TGMLGCRASTTPIDRNHQLCAQSGDPV-NKEAYQRLVGRLIYLCHTRPDISYVVSVVSRY 461

Query: 540  MHSPRTTHMDAVNRILRYLKSAPGLGLFYPVGGSPDLVSYSDADYAGSLSDHRSTSGLCT 719
            MH PRT H+D V++ILRYLK  PG GL++   G  ++  Y DAD+A S+ D RSTSG C 
Sbjct: 462  MHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCV 521

Query: 720  FYGGCLIXXXXXXXXXXXXXXAEVEYRAMAHGACEILWLRSLLIELGFPPSEGSPLHCD 896
            F GG L+              AE EYRAMA    E+LW+RSLL EL    S+   LHCD
Sbjct: 522  FVGGNLVSWRSKKQAVVARSTAEAEYRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCD 580


>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711651|gb|ABF99446.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score =  325 bits (833), Expect = 9e-87
 Identities = 169/299 (56%), Positives = 204/299 (68%), Gaps = 1/299 (0%)
 Frame = +3

Query: 3    KVCRLLKSIYGLKQSPRAWFQLFSFVILSMGFARCQSDHTCFI-HRSVSGFRTIVLVYVD 179
            KVC+L KS+YGLKQSPRAWF  F   +  MG+++C  DHT F  HR      TI+ VYVD
Sbjct: 1022 KVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHTVFYKHRGTH--ITILAVYVD 1079

Query: 180  DIIITGDDTLYIAKVKANLGTTFDIKDLGPMRYFLGIEVARSRHGISLSQRKYTLDLLHD 359
            DI+ITGDD   I  +K  LG  F++KDLGP+RYFLGIE+ARS  GI LSQRKY LDLL D
Sbjct: 1080 DIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTD 1139

Query: 360  TGMLGCRPSQTPMDPNHRLHAEVGDLLPDPSHYQRLVGRLIYLTNTRPDIAFVVSTVSQF 539
            TGMLGCR S TP+D NH+L A+ GD + D   YQRLVGRLIYL +TRPDI++ VS VS++
Sbjct: 1140 TGMLGCRASTTPIDRNHQLCAQSGDPV-DKEAYQRLVGRLIYLCHTRPDISYAVSVVSRY 1198

Query: 540  MHSPRTTHMDAVNRILRYLKSAPGLGLFYPVGGSPDLVSYSDADYAGSLSDHRSTSGLCT 719
            MH PRT H+D V++ILRYLK  PG GL++   G  ++  Y DAD+A S+ D RSTSG C 
Sbjct: 1199 MHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCV 1258

Query: 720  FYGGCLIXXXXXXXXXXXXXXAEVEYRAMAHGACEILWLRSLLIELGFPPSEGSPLHCD 896
            F GG L+              AE EYRAMA    E+LW+RSLL EL    S+   LHCD
Sbjct: 1259 FVGGNLVSWRSKKQAVVARSTAEAEYRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCD 1317


>emb|CAA36616.1| unnamed protein product [Solanum tuberosum]
          Length = 390

 Score =  323 bits (829), Expect = 3e-86
 Identities = 165/298 (55%), Positives = 208/298 (69%)
 Frame = +3

Query: 3   KVCRLLKSIYGLKQSPRAWFQLFSFVILSMGFARCQSDHTCFIHRSVSGFRTIVLVYVDD 182
           K+CRL +S+YGLKQSPRAWF+ F+  +   G+ + Q+DHT F   S+ G  T+++VYVDD
Sbjct: 29  KICRLRRSLYGLKQSPRAWFERFTQFVKRQGYVQGQADHTMFTRHSLEGKTTVLIVYVDD 88

Query: 183 IIITGDDTLYIAKVKANLGTTFDIKDLGPMRYFLGIEVARSRHGISLSQRKYTLDLLHDT 362
           II+TGDD + I  +K  L + F+IKDLGP++YFLG+EVARS+ GI +SQRKY LDLL +T
Sbjct: 89  IILTGDDVVEIKNLKERLASEFEIKDLGPLKYFLGMEVARSKKGIIVSQRKYVLDLLKET 148

Query: 363 GMLGCRPSQTPMDPNHRLHAEVGDLLPDPSHYQRLVGRLIYLTNTRPDIAFVVSTVSQFM 542
           GM GCRP++TP+DPN +   E G L+ D   YQRLVG+LIYL++TRPDI+F VS V QFM
Sbjct: 149 GMSGCRPTETPIDPNLKFVKE-GKLI-DKGQYQRLVGKLIYLSHTRPDISFAVSLVIQFM 206

Query: 543 HSPRTTHMDAVNRILRYLKSAPGLGLFYPVGGSPDLVSYSDADYAGSLSDHRSTSGLCTF 722
           H PR  H +AV RILRYLKS+PG GLF+       L +Y+DAD+AGS  D RSTSG CTF
Sbjct: 207 HYPREEHQEAVYRILRYLKSSPGKGLFFKKNEQRSLEAYTDADWAGSSIDRRSTSGYCTF 266

Query: 723 YGGCLIXXXXXXXXXXXXXXAEVEYRAMAHGACEILWLRSLLIELGFPPSEGSPLHCD 896
             G L+              AE EYR+MA G CEILWL+  L EL  P S    L+CD
Sbjct: 267 VWGNLVTWRSKKQNVVARSSAEAEYRSMALGICEILWLKRFLEELRRPVSFPMKLYCD 324


>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1588

 Score =  322 bits (826), Expect = 6e-86
 Identities = 166/298 (55%), Positives = 205/298 (68%)
 Frame = +3

Query: 3    KVCRLLKSIYGLKQSPRAWFQLFSFVILSMGFARCQSDHTCFIHRSVSGFRTIVLVYVDD 182
            KVCRL KS+YGLKQSPRAWF  F   + +MG+++C  DHT F +R      TI+ VYVDD
Sbjct: 1217 KVCRLKKSLYGLKQSPRAWFDRFRRALCNMGYSQCNGDHTVF-YRHRGAHITILAVYVDD 1275

Query: 183  IIITGDDTLYIAKVKANLGTTFDIKDLGPMRYFLGIEVARSRHGISLSQRKYTLDLLHDT 362
            I+ITGDD   I  +K  LG  F++KDLGP+RYFLGIEVARS  GI LSQRKY LDLL +T
Sbjct: 1276 IVITGDDVEEIKCLKQRLGEAFEVKDLGPLRYFLGIEVARSSKGIVLSQRKYVLDLLTET 1335

Query: 363  GMLGCRPSQTPMDPNHRLHAEVGDLLPDPSHYQRLVGRLIYLTNTRPDIAFVVSTVSQFM 542
            GMLGCR S TP+D NH+L A+ GD + D   YQRLVGRLIYL +TRPDI++ VS VS++M
Sbjct: 1336 GMLGCRTSATPIDRNHQLSAQSGDPV-DRETYQRLVGRLIYLCHTRPDISYAVSVVSRYM 1394

Query: 543  HSPRTTHMDAVNRILRYLKSAPGLGLFYPVGGSPDLVSYSDADYAGSLSDHRSTSGLCTF 722
            H PRTTH++ V+RILRYLK  PG GL++      D+  Y DAD+A S+ D RSTSG C F
Sbjct: 1395 HDPRTTHLEVVHRILRYLKGTPGKGLWFRKNQHLDVEGYCDADWASSVDDRRSTSGYCVF 1454

Query: 723  YGGCLIXXXXXXXXXXXXXXAEVEYRAMAHGACEILWLRSLLIELGFPPSEGSPLHCD 896
             GG ++              AE EYRAMA    E+LW+++LL+EL    +    LHCD
Sbjct: 1455 VGGNVVCWRSKKQAVVAQSTAEAEYRAMALSLSEMLWVKNLLLELRLFRNNTVVLHCD 1512