BLASTX nr result

ID: Coptis23_contig00034581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034581
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chl...   134   6e-30
emb|CBI18108.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_003530306.1| PREDICTED: MATE efflux family protein 2, chl...   132   2e-29
ref|XP_002862903.1| hypothetical protein ARALYDRAFT_497252 [Arab...   127   7e-28
ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ri...   127   1e-27

>ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chloroplastic [Vitis
           vinifera]
          Length = 561

 Score =  134 bits (338), Expect = 6e-30
 Identities = 74/119 (62%), Positives = 79/119 (66%)
 Frame = +3

Query: 45  KKLFPAVSTSXXXXXXXXXXXXXXXSFGSGFLMNILCISVDSPMRLPAEQFLALRAFGAP 224
           K L P+VSTS               S GSGFLMNI+ I VDSPMR+PAEQFL LRAFGAP
Sbjct: 198 KMLLPSVSTSLALAAGIGIAEAVALSVGSGFLMNIMGIPVDSPMRVPAEQFLTLRAFGAP 257

Query: 225 AIVMALAAQGTFRGFMDTKTPLYATVTGNLLNAILDPVXXXXXXXXXXXXXXSTVISEY 401
            IV+ALAAQGTFRGF DTKTPLYA   GNLLNAILDP+              STVISEY
Sbjct: 258 PIVIALAAQGTFRGFKDTKTPLYAVGAGNLLNAILDPILIFLLGLGIGGAAISTVISEY 316


>emb|CBI18108.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  134 bits (338), Expect = 6e-30
 Identities = 74/119 (62%), Positives = 79/119 (66%)
 Frame = +3

Query: 45  KKLFPAVSTSXXXXXXXXXXXXXXXSFGSGFLMNILCISVDSPMRLPAEQFLALRAFGAP 224
           K L P+VSTS               S GSGFLMNI+ I VDSPMR+PAEQFL LRAFGAP
Sbjct: 195 KMLLPSVSTSLALAAGIGIAEAVALSVGSGFLMNIMGIPVDSPMRVPAEQFLTLRAFGAP 254

Query: 225 AIVMALAAQGTFRGFMDTKTPLYATVTGNLLNAILDPVXXXXXXXXXXXXXXSTVISEY 401
            IV+ALAAQGTFRGF DTKTPLYA   GNLLNAILDP+              STVISEY
Sbjct: 255 PIVIALAAQGTFRGFKDTKTPLYAVGAGNLLNAILDPILIFLLGLGIGGAAISTVISEY 313


>ref|XP_003530306.1| PREDICTED: MATE efflux family protein 2, chloroplastic-like
           [Glycine max]
          Length = 535

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/120 (60%), Positives = 79/120 (65%)
 Frame = +3

Query: 42  SKKLFPAVSTSXXXXXXXXXXXXXXXSFGSGFLMNILCISVDSPMRLPAEQFLALRAFGA 221
           SKKL P+VSTS               + GSG LMNI+ I  DSPMR PAEQFL LRAFGA
Sbjct: 175 SKKLLPSVSTSLALAATLGIAETVVLTLGSGILMNIMGIPADSPMRGPAEQFLTLRAFGA 234

Query: 222 PAIVMALAAQGTFRGFMDTKTPLYATVTGNLLNAILDPVXXXXXXXXXXXXXXSTVISEY 401
           PAIV+ALAAQGTFRGF+DTKTPLYA   GN LNAILDP+              +TVISEY
Sbjct: 235 PAIVLALAAQGTFRGFLDTKTPLYAVGVGNFLNAILDPILIFLFGLGIGGAAVATVISEY 294


>ref|XP_002862903.1| hypothetical protein ARALYDRAFT_497252 [Arabidopsis lyrata subsp.
           lyrata] gi|297308672|gb|EFH39162.1| hypothetical protein
           ARALYDRAFT_497252 [Arabidopsis lyrata subsp. lyrata]
          Length = 413

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/126 (53%), Positives = 80/126 (63%)
 Frame = +3

Query: 24  SAKLMNSKKLFPAVSTSXXXXXXXXXXXXXXXSFGSGFLMNILCISVDSPMRLPAEQFLA 203
           S  +  SKK+ P+VSTS               S GS FLM+++ I  DSPMR+PAEQFL 
Sbjct: 46  SDSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAIPFDSPMRIPAEQFLR 105

Query: 204 LRAFGAPAIVMALAAQGTFRGFMDTKTPLYATVTGNLLNAILDPVXXXXXXXXXXXXXXS 383
           LRA+GAP IV+ALAAQG FRGF DT TPLYA V GN+LNAILDP+              +
Sbjct: 106 LRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAILDPILIFVLGFGISGAAAA 165

Query: 384 TVISEY 401
           TVISEY
Sbjct: 166 TVISEY 171


>ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ricinus communis]
           gi|223533979|gb|EEF35701.1| DNA-damage-inducible protein
           f, putative [Ricinus communis]
          Length = 560

 Score =  127 bits (318), Expect = 1e-27
 Identities = 70/119 (58%), Positives = 75/119 (63%)
 Frame = +3

Query: 45  KKLFPAVSTSXXXXXXXXXXXXXXXSFGSGFLMNILCISVDSPMRLPAEQFLALRAFGAP 224
           K   PAVSTS                FGSGFLMNI+ I VDSPMR+PAE FL  RAFGAP
Sbjct: 195 KAYLPAVSTSLALAAGVGIAEAIALFFGSGFLMNIMGIPVDSPMRIPAENFLTWRAFGAP 254

Query: 225 AIVMALAAQGTFRGFMDTKTPLYATVTGNLLNAILDPVXXXXXXXXXXXXXXSTVISEY 401
            IV+ALAAQGTFRGF DTKTPLYA   GNLLNAILDP+              +TV SEY
Sbjct: 255 PIVIALAAQGTFRGFKDTKTPLYAIGAGNLLNAILDPILIFTFGFGIGGAAIATVTSEY 313


Top