BLASTX nr result

ID: Coptis23_contig00034575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034575
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cuc...    88   6e-16
ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215...    88   6e-16
ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242...    87   1e-15
emb|CAN69354.1| hypothetical protein VITISV_014039 [Vitis vinifera]    87   1e-15
ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242...    73   3e-11

>ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cucumis sativus]
          Length = 514

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/114 (44%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
 Frame = +1

Query: 10  VGSASVSRVFNQSLIDLSRRASFDGRLNPKFGRGEISKTVHLSIGADSSYGSD---DVNM 180
           +GS  V R   Q++ D SRRASFDGRL+      E+ K V  +  ADS   S    D+  
Sbjct: 247 IGSGMVVRALQQTISDDSRRASFDGRLSLDLNSSELIKAVRQNPDADSVNESSVPSDLTT 306

Query: 181 XXXXXXXXXXXXXXQEYGAIASGRAVPRGISAPARFWQETNSRMRRLQEPGSPL 342
                         Q+ G++A GR  PRGI   ARFWQETNSR+RRL +PGSPL
Sbjct: 307 SDTDSVSSGSTSGVQDCGSVAKGRNGPRGIVVSARFWQETNSRLRRLHDPGSPL 360


>ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215899 [Cucumis sativus]
          Length = 667

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/114 (44%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
 Frame = +1

Query: 10  VGSASVSRVFNQSLIDLSRRASFDGRLNPKFGRGEISKTVHLSIGADSSYGSD---DVNM 180
           +GS  V R   Q++ D SRRASFDGRL+      E+ K V  +  ADS   S    D+  
Sbjct: 247 IGSGMVVRALQQTISDDSRRASFDGRLSLDLNSSELIKAVRQNPDADSVNESSVPSDLTT 306

Query: 181 XXXXXXXXXXXXXXQEYGAIASGRAVPRGISAPARFWQETNSRMRRLQEPGSPL 342
                         Q+ G++A GR  PRGI   ARFWQETNSR+RRL +PGSPL
Sbjct: 307 SDTDSVSSGSTSGVQDCGSVAKGRNGPRGIVVSARFWQETNSRLRRLHDPGSPL 360


>ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
          Length = 639

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/116 (43%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = +1

Query: 4   KVVGSASVSRVFNQSLIDLSRRASFDGRLNPKFGRGEISKTVHLSIGADSSYGSD---DV 174
           K +GS  V   F QS+ID SRRASFDGRL+   G  E+ K        +S+  S    D+
Sbjct: 213 KSIGSGIVVGSFQQSMIDESRRASFDGRLSLDLGNAELLKVTKQDPDGNSANDSSVPTDL 272

Query: 175 NMXXXXXXXXXXXXXXQEYGAIASGRAVPRGISAPARFWQETNSRMRRLQEPGSPL 342
                           QE   ++  R+ PRGI   ARFWQETNSR+RRLQ+PGSPL
Sbjct: 273 TASDTDSVSSGSTSGLQECAGVSGRRSGPRGIVVSARFWQETNSRLRRLQDPGSPL 328


>emb|CAN69354.1| hypothetical protein VITISV_014039 [Vitis vinifera]
          Length = 601

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/116 (43%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = +1

Query: 4   KVVGSASVSRVFNQSLIDLSRRASFDGRLNPKFGRGEISKTVHLSIGADSSYGSD---DV 174
           K +GS  V   F QS+ID SRRASFDGRL+   G  E+ K        +S+  S    D+
Sbjct: 213 KSIGSGIVVGSFQQSMIDESRRASFDGRLSLDLGNAELLKVTKQDPDGNSANDSSVPTDL 272

Query: 175 NMXXXXXXXXXXXXXXQEYGAIASGRAVPRGISAPARFWQETNSRMRRLQEPGSPL 342
                           QE   ++  R+ PRGI   ARFWQETNSR+RRLQ+PGSPL
Sbjct: 273 TASDTDSVSSGSTSGLQECAGVSGRRSGPRGIVVSARFWQETNSRLRRLQDPGSPL 328


>ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242050 [Vitis vinifera]
          Length = 743

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 48/118 (40%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
 Frame = +1

Query: 4   KVVGSASVSRVFNQSLIDLSRRASFDGRLNPKFGRGEISKTVHLSIGADSSYGS---DDV 174
           K+ GS  ++R   QS+ID   R   DGRLN   G  E+ K   L + A+S  GS    D 
Sbjct: 316 KLGGSGIMARSLQQSMIDERNRTPLDGRLNLDSGNAELGKANEL-VNANSVVGSTMTSDP 374

Query: 175 NMXXXXXXXXXXXXXXQEYGAIASG---RAVPRGISAPARFWQETNSRMRRLQEPGSP 339
                           QE G    G   R VPRGI  PARFWQET++R+RR  EP SP
Sbjct: 375 AASDTESVSSGSTSGAQESGGGGGGTQGRGVPRGIMVPARFWQETSNRLRRTPEPSSP 432


Top