BLASTX nr result

ID: Coptis23_contig00034569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034569
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443418.1| hypothetical protein SORBIDRAFT_08g019165 [S...   105   4e-21
gb|ABA94905.1| transposon protein, putative, CACTA, En/Spm sub-c...   104   9e-21
gb|AAX96683.1| transposon protein, putative, CACTA, En/Spm sub-c...   104   9e-21
ref|XP_003635137.1| PREDICTED: uncharacterized protein LOC100854...   104   9e-21
ref|XP_003555169.1| PREDICTED: uncharacterized protein LOC100819...   103   1e-20

>ref|XP_002443418.1| hypothetical protein SORBIDRAFT_08g019165 [Sorghum bicolor]
           gi|241944111|gb|EES17256.1| hypothetical protein
           SORBIDRAFT_08g019165 [Sorghum bicolor]
          Length = 436

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/90 (51%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
 Frame = -1

Query: 255 DKINKNWLSFSNDAWNRRLAFAADGMNPYWGLSSKYSIWPVMLVMYNSPPWLCIKKENMI 76
           +  N+    F++DA N RL  A+DG NP+  +SSK+S WPVMLV YN PPW+C+K+ +++
Sbjct: 341 EDFNRRNPDFASDARNVRLGLASDGFNPFRNMSSKHSTWPVMLVPYNLPPWICMKQTSLL 400

Query: 75  LALLI-----PGDEIDVYLQPLIDDLLELW 1
           L+++I     PG+++D+YLQPLID+LLELW
Sbjct: 401 LSMIIPGPDSPGNDVDIYLQPLIDELLELW 430


>gb|ABA94905.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 1086

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/82 (54%), Positives = 65/82 (79%), Gaps = 5/82 (6%)
 Frame = -1

Query: 231 SFSNDAWNRRLAFAADGMNPYWGLSSKYSIWPVMLVMYNSPPWLCIKKENMILALLI--- 61
           SFS DA N RL  A+DG NP+  +SSK+S WPVML+ YN PPW+C+K+ ++IL+++I   
Sbjct: 304 SFSADARNVRLGLASDGFNPFRNMSSKHSTWPVMLIPYNLPPWICMKQTSLILSMIIPGP 363

Query: 60  --PGDEIDVYLQPLIDDLLELW 1
             PG++ID+YL+PL+D+LL+LW
Sbjct: 364 DSPGNDIDIYLEPLVDELLQLW 385


>gb|AAX96683.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group] gi|77549735|gb|ABA92532.1| transposon
           protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 1305

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/88 (51%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
 Frame = -1

Query: 249 INKNWLSFSNDAWNRRLAFAADGMNPYWGLSSKYSIWPVMLVMYNSPPWLCIKKENMILA 70
           +N  +  FS +A N RL  A+DG+NP+  +SSK+S WPVML+ YN PPW+C+K+ ++IL+
Sbjct: 491 LNTRYPGFSANARNVRLGLASDGLNPFRNMSSKHSTWPVMLIPYNLPPWICMKQTSLILS 550

Query: 69  LLI-----PGDEIDVYLQPLIDDLLELW 1
           ++I     PG++IDVYL+PL+D+LL+LW
Sbjct: 551 MIIPGPHSPGNDIDVYLEPLVDELLQLW 578


>ref|XP_003635137.1| PREDICTED: uncharacterized protein LOC100854370 [Vitis vinifera]
          Length = 970

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/88 (52%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
 Frame = -1

Query: 249 INKNWLSFSNDAWNRRLAFAADGMNPYWGLSSKYSIWPVMLVMYNSPPWLCIKKENMILA 70
           ++  W  FS++  N RLA +ADG+NP+  LSSK+S WPV++++YN PPWLC+K++ M+L+
Sbjct: 188 VDHRWPEFSSEPRNLRLAISADGINPHSSLSSKHSCWPVLMIIYNLPPWLCMKRKFMMLS 247

Query: 69  LLI-----PGDEIDVYLQPLIDDLLELW 1
           LLI     PG++ID+YL PLI+DL  LW
Sbjct: 248 LLISGPRQPGNDIDIYLAPLIEDLKTLW 275


>ref|XP_003555169.1| PREDICTED: uncharacterized protein LOC100819840 [Glycine max]
          Length = 1182

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/89 (52%), Positives = 67/89 (75%), Gaps = 5/89 (5%)
 Frame = -1

Query: 252 KINKNWLSFSNDAWNRRLAFAADGMNPYWGLSSKYSIWPVMLVMYNSPPWLCIKKENMIL 73
           KI++ +  F  +A N RL  A DGMNPY  LS+++S WPV+LV+YN PPWLC+K++ M+L
Sbjct: 179 KIDRLYPDFGKEARNLRLGLATDGMNPYGSLSTQHSSWPVLLVIYNLPPWLCMKRKYMML 238

Query: 72  ALLI-----PGDEIDVYLQPLIDDLLELW 1
           +++I     PG++IDVYL PLI+DL +LW
Sbjct: 239 SMMITGPRQPGNDIDVYLNPLIEDLTKLW 267


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