BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034558
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        72   5e-11
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              68   7e-10
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                68   7e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    68   9e-10
gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]        67   1e-09

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/96 (31%), Positives = 54/96 (56%)
 Frame = +3

Query: 12   YWSRTFILLVTALEQVEKICAQFL*TGTTMKKGHHQACWSTVCLPKDEGGLGVMNLQRWN 191
            +W  TF+L    ++++E +C++FL +G   +    +  W+ +CLPK EGGLG+  L  WN
Sbjct: 817  FWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWN 876

Query: 192  LGAYCGLMFKLVTREDTIWVD*TWKQHIKDKYFWSM 299
                  L+++L   +D++W D     H+    FW++
Sbjct: 877  KTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAV 912


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/99 (31%), Positives = 55/99 (55%)
 Frame = +3

Query: 12  YWSRTFILLVTALEQVEKICAQFL*TGTTMKKGHHQACWSTVCLPKDEGGLGVMNLQRWN 191
           +W   F L    + +++KIC+ FL +G  +     + CW  VC PK EGGLG+ +L+  N
Sbjct: 351 FWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMN 410

Query: 192 LGAYCGLMFKLVTREDTIWVD*TWKQHIKDKYFWSMSIT 308
             +   L++++V+  +++WV    +  +K   FWS+  T
Sbjct: 411 EVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTT 449


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = +3

Query: 12  YWSRTFILLVTALEQVEKICAQFL*TGTTMKKGHHQACWSTVCLPKDEGGLGVMNLQRWN 191
           +W   F L    ++++EK+C+ FL +GT +     +  W+ VC PK EGGLG+ +L+  N
Sbjct: 377 FWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEAN 436

Query: 192 LGAYCGLMFKLVTREDTIWVD*TWKQH--IKDKYFW 293
                 L++++++  D++WV   W +H  +K + FW
Sbjct: 437 DVCCLKLVWRIISHGDSLWV--KWVEHNLLKREIFW 470


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/99 (32%), Positives = 55/99 (55%)
 Frame = +3

Query: 12   YWSRTFILLVTALEQVEKICAQFL*TGTTMKKGHHQACWSTVCLPKDEGGLGVMNLQRWN 191
            +W   F L    + ++EK+C+ FL +GT M     +  W  VC PKDEGGLG+ +L+  N
Sbjct: 824  FWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEAN 883

Query: 192  LGAYCGLMFKLVTREDTIWVD*TWKQHIKDKYFWSMSIT 308
                  L++K+V+  +++WV    +  +++  FW +  T
Sbjct: 884  DVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQT 922


>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
          Length = 438

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = +3

Query: 12  YWSRTFILLVTALEQVEKICAQFL*TGTTMKKGHHQACWSTVCLPKDEGGLGVMNLQRWN 191
           +W  TF L    + ++E +CA+FL +G T +    +  WSTVCLPK EGGLGV     WN
Sbjct: 88  FWMSTFRLPKGCIREIESMCARFLWSGGTDEHHKAKVSWSTVCLPKAEGGLGVRKFTEWN 147

Query: 192 LGAYCGLMFKLVTREDTIWV 251
                 L++ L +   ++WV
Sbjct: 148 TALNLKLIWLLFSNSGSLWV 167