BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034557
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]              360   4e-97
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...   338   1e-90
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...   338   1e-90
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   333   3e-89
ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  360 bits (923), Expect = 4e-97
 Identities = 173/344 (50%), Positives = 229/344 (66%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFC 854
            R D VW+ YGEM+E  +  D  TVGYL++A+C +N+  + + LL++VLE G VP    F 
Sbjct: 242  RIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFN 301

Query: 853  KLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEK 674
            KLI+ FCK + YG+VS+LLH MIA+N AP IFTYQE++ GLC    G E FRVF  LK++
Sbjct: 302  KLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDR 361

Query: 673  GYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMA 494
            GYAP RVMY TMI GLC M+ +  AR+LWFEM+ KGF+PNE+TYN  +HG  K G  + A
Sbjct: 362  GYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEA 421

Query: 493  WKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQG 314
            WK+++EM D+G  +   +YN MI      GK+ EA  LFEEM    I R+ + YN++++G
Sbjct: 422  WKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRG 481

Query: 313  FCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVTGEMQAALDLWKDMLHRNVEPW 134
            FCK  +  +     +EL+  G QPSAA+Y  LI  LC  G+MQ A  LW DM +R +EP 
Sbjct: 482  FCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPA 541

Query: 133  ISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMIK 2
            + THD +I GFCKQG   EGM WLT ML    RP +K+F  +I+
Sbjct: 542  VCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQ 585



 Score =  129 bits (324), Expect = 1e-27
 Identities = 82/322 (25%), Positives = 148/322 (45%)
 Frame = -3

Query: 976  DADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKVRDYGKVSELL 797
            D  T   ++   C   K  E + + K + + G+ P  +++  +I   C+++  G   +L 
Sbjct: 331  DIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLW 390

Query: 796  HLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEM 617
              MI K   P  +TY  +I+G        EA++++  + +KGY    V YN MI GLC  
Sbjct: 391  FEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSH 450

Query: 616  RQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNY 437
             ++  A +L+ EM  KG + N  TYN  + G CK G+      L  E+ D+G++ +  +Y
Sbjct: 451  GKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASY 510

Query: 436  NTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIA 257
              +I      G +  A  L+++M    ++     ++ MI GFCK     + M++   ++ 
Sbjct: 511  APLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLR 570

Query: 256  TGSQPSAAAYHSLIRALCVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTRE 77
            +  +P   ++ SLI+ L     +  AL +   ML       IS  ++++           
Sbjct: 571  SKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLV----------- 619

Query: 76   GMSWLTRMLEKNFRPLEKTFNE 11
                 T++ EKN  P+ K  N+
Sbjct: 620  -----TKLCEKNSLPILKIVND 636



 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 66/296 (22%), Positives = 116/296 (39%)
 Frame = -3

Query: 889  ESGFVPHGIVFCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGA 710
            +SGF P     C ++  F  + + G  +     + + N  P   + +  I  LC   +  
Sbjct: 153  QSGFSPDSSS-CNVL--FDALVEAGACNAAKSFLDSTNFNPKPASLEAYIRCLCKGGLVE 209

Query: 709  EAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFM 530
            EA  VF  LK  G       +N+++ G     ++    EL+ EM+    + + HT    +
Sbjct: 210  EAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLV 269

Query: 529  HGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIK 350
               C   +      L + + + G+      +N +IS F           L   M      
Sbjct: 270  QAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRA 329

Query: 349  RDAVNYNSMIQGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVTGEMQAALDL 170
             D   Y  ++ G CK  +  +  + + +L   G  P    Y ++I  LC    +  A  L
Sbjct: 330  PDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL 389

Query: 169  WKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMIK 2
            W +M+ +   P   T++ +I G+ K GN  E       M +K +     ++N MIK
Sbjct: 390  WFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIK 445


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950-like
            [Cucumis sativus]
          Length = 638

 Score =  338 bits (867), Expect = 1e-90
 Identities = 166/346 (47%), Positives = 227/346 (65%), Gaps = 2/346 (0%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGGDAD--TVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIV 860
            R+D++WK Y  MME G+  D D  TVGYLI+A+C DNK   AYE+L+Q LE G  P    
Sbjct: 241  RTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDA 300

Query: 859  FCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALK 680
            F KLI+ FCK +++ +V EL+H MI KN  P IFTYQEII G C N M  +AF VFNALK
Sbjct: 301  FNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALK 360

Query: 679  EKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFD 500
            ++GYAP  VMY T+I G C+M Q+  A +LWFEM+ KGF+PNE++YN  ++G CK G  D
Sbjct: 361  DRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLD 420

Query: 499  MAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMI 320
             A KL+K+M D G ++   + NT+I    L G+ +EA   F EMP   I  D + YN++I
Sbjct: 421  EAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLI 480

Query: 319  QGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVTGEMQAALDLWKDMLHRNVE 140
            QGFC+  +  ++     EL A G QPS ++Y  LI+ LC  G +Q A ++W DM +R ++
Sbjct: 481  QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQ 540

Query: 139  PWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMIK 2
            P + T D+II G C+QG   EGM WL  ML+ N +P ++TF ++I+
Sbjct: 541  PMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQ 586



 Score =  108 bits (269), Expect = 3e-21
 Identities = 64/262 (24%), Positives = 124/262 (47%)
 Frame = -3

Query: 976  DADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKVRDYGKVSELL 797
            D  T   +I  +C +    +A+E+   + + G+ P  +++  LI  FCK+      S+L 
Sbjct: 332  DIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLW 391

Query: 796  HLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEM 617
              MI K   P  ++Y  +IYG C      EA +++  + + GY    +  NT+I GLC  
Sbjct: 392  FEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLH 451

Query: 616  RQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNY 437
             +   A + + EM  K  + +  TYN  + G C+ G+   +  L KE+  +GL+ +  +Y
Sbjct: 452  GRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSY 511

Query: 436  NTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIA 257
              +I      G + EA  ++ +M    ++      + +I G C+     + M++   ++ 
Sbjct: 512  AHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLK 571

Query: 256  TGSQPSAAAYHSLIRALCVTGE 191
            +  +P    ++ LI++L   G+
Sbjct: 572  SNLKPQKETFYKLIQSLIQIGK 593



 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 76/365 (20%), Positives = 139/365 (38%), Gaps = 72/365 (19%)
 Frame = -3

Query: 880  FVPHGIVFCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAF 701
            F+PH +   KL     + +        L+       +P   + +  I  +C   +  EA 
Sbjct: 155  FLPHPVSCNKLFDALLEAKACVPAKSFLYSF---EFSPEPASLENYIRCVCEGGLVEEAV 211

Query: 700  RVFNALKEKGYAPHRVMYN-------------------------------------TMID 632
              F+ LKE GY P+   +N                                      +I 
Sbjct: 212  YTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQ 271

Query: 631  GLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFD---------------- 500
              C   ++  A E+  + L  G  P    +N  + G CK                     
Sbjct: 272  AFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNP 331

Query: 499  -------------------MAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALF 377
                                A++++  + DRG   +   Y T+I  F   G+L +A  L+
Sbjct: 332  DIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLW 391

Query: 376  EEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVT 197
             EM       +  +YN++I GFCKI    +AMK Y +++ +G + +  + ++LI  LC+ 
Sbjct: 392  FEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLH 451

Query: 196  GEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTF 17
            G    A D +++M  +N+   + T++ +I GFC++G   +    L  +  K  +P   ++
Sbjct: 452  GRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSY 511

Query: 16   NEMIK 2
              +I+
Sbjct: 512  AHLIQ 516



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 57/239 (23%), Positives = 107/239 (44%)
 Frame = -3

Query: 1018 WKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIAR 839
            ++ +  + + G   D      LI  +C   +  +A +L  ++++ GF+P+   +  LI  
Sbjct: 353  FEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYG 412

Query: 838  FCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPH 659
            FCK+ +  +  +L   M+      T  +   +I GLC +    EA+  F  +  K     
Sbjct: 413  FCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCD 472

Query: 658  RVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWK 479
             + YNT+I G C   ++L + +L  E+ +KG  P+  +Y   +   C+ G    A ++W 
Sbjct: 473  VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWN 532

Query: 478  EMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKI 302
            +M +RGL+      + +IS     G + E       M K  +K     +  +IQ   +I
Sbjct: 533  DMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQI 591



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 50/205 (24%), Positives = 86/205 (41%)
 Frame = -3

Query: 1015 KFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARF 836
            K + EM++ G   +  +   LI  +C      EA +L K++L+SG+    +    LI   
Sbjct: 389  KLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGL 448

Query: 835  CKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHR 656
            C      +  +    M  KN    + TY  +I G C      ++  +   L+ KG  P  
Sbjct: 449  CLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPST 508

Query: 655  VMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKE 476
              Y  +I  LC++  +  A+E+W +M ++G  P   T +  + G C+ G      +    
Sbjct: 509  SSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLIT 568

Query: 475  MSDRGLRKNKFNYNTMISSFSLGGK 401
            M    L+  K  +  +I S    GK
Sbjct: 569  MLKSNLKPQKETFYKLIQSLIQIGK 593



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 5/202 (2%)
 Frame = -3

Query: 1027 DVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKL 848
            D   K Y +M++ G      +   LI   C   +  EAY+  +++     V   I +  L
Sbjct: 420  DEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTL 479

Query: 847  IARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 668
            I  FC+     + ++LL  + AK   P+  +Y  +I  LC      EA  ++N +  +G 
Sbjct: 480  IQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGL 539

Query: 667  APHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSG-----QF 503
             P     + +I GLCE   ++   E    ML     P + T+   +    + G     + 
Sbjct: 540  QPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKELLLEL 599

Query: 502  DMAWKLWKEMSDRGLRKNKFNY 437
             M  K  KE+    + K+  N+
Sbjct: 600  KMDSKTSKEVYPLAMTKSSSNF 621



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 34/144 (23%), Positives = 63/144 (43%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFC 854
            R+D  + F+ EM    +  D  T   LI+ +C + K  ++ +LLK++   G  P    + 
Sbjct: 453  RTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYA 512

Query: 853  KLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEK 674
             LI + C++    +  E+ + M  +   P + T   II GLC      E       + + 
Sbjct: 513  HLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKS 572

Query: 673  GYAPHRVMYNTMIDGLCEMRQMLL 602
               P +  +  +I  L ++ + LL
Sbjct: 573  NLKPQKETFYKLIQSLIQIGKELL 596


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950-like
            [Cucumis sativus]
          Length = 602

 Score =  338 bits (867), Expect = 1e-90
 Identities = 166/346 (47%), Positives = 227/346 (65%), Gaps = 2/346 (0%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGGDAD--TVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIV 860
            R+D++WK Y  MME G+  D D  TVGYLI+A+C DNK   AYE+L+Q LE G  P    
Sbjct: 205  RTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDA 264

Query: 859  FCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALK 680
            F KLI+ FCK +++ +V EL+H MI KN  P IFTYQEII G C N M  +AF VFNALK
Sbjct: 265  FNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALK 324

Query: 679  EKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFD 500
            ++GYAP  VMY T+I G C+M Q+  A +LWFEM+ KGF+PNE++YN  ++G CK G  D
Sbjct: 325  DRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLD 384

Query: 499  MAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMI 320
             A KL+K+M D G ++   + NT+I    L G+ +EA   F EMP   I  D + YN++I
Sbjct: 385  EAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLI 444

Query: 319  QGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVTGEMQAALDLWKDMLHRNVE 140
            QGFC+  +  ++     EL A G QPS ++Y  LI+ LC  G +Q A ++W DM +R ++
Sbjct: 445  QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQ 504

Query: 139  PWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMIK 2
            P + T D+II G C+QG   EGM WL  ML+ N +P ++TF ++I+
Sbjct: 505  PMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQ 550



 Score =  108 bits (269), Expect = 3e-21
 Identities = 64/262 (24%), Positives = 124/262 (47%)
 Frame = -3

Query: 976  DADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKVRDYGKVSELL 797
            D  T   +I  +C +    +A+E+   + + G+ P  +++  LI  FCK+      S+L 
Sbjct: 296  DIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLW 355

Query: 796  HLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEM 617
              MI K   P  ++Y  +IYG C      EA +++  + + GY    +  NT+I GLC  
Sbjct: 356  FEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLH 415

Query: 616  RQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNY 437
             +   A + + EM  K  + +  TYN  + G C+ G+   +  L KE+  +GL+ +  +Y
Sbjct: 416  GRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSY 475

Query: 436  NTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIA 257
              +I      G + EA  ++ +M    ++      + +I G C+     + M++   ++ 
Sbjct: 476  AHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLK 535

Query: 256  TGSQPSAAAYHSLIRALCVTGE 191
            +  +P    ++ LI++L   G+
Sbjct: 536  SNLKPQKETFYKLIQSLIQIGK 557



 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 76/365 (20%), Positives = 139/365 (38%), Gaps = 72/365 (19%)
 Frame = -3

Query: 880  FVPHGIVFCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAF 701
            F+PH +   KL     + +        L+       +P   + +  I  +C   +  EA 
Sbjct: 119  FLPHPVSCNKLFDALLEAKACVPAKSFLYSF---EFSPEPASLENYIRCVCEGGLVEEAV 175

Query: 700  RVFNALKEKGYAPHRVMYN-------------------------------------TMID 632
              F+ LKE GY P+   +N                                      +I 
Sbjct: 176  YTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQ 235

Query: 631  GLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFD---------------- 500
              C   ++  A E+  + L  G  P    +N  + G CK                     
Sbjct: 236  AFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNP 295

Query: 499  -------------------MAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALF 377
                                A++++  + DRG   +   Y T+I  F   G+L +A  L+
Sbjct: 296  DIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLW 355

Query: 376  EEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVT 197
             EM       +  +YN++I GFCKI    +AMK Y +++ +G + +  + ++LI  LC+ 
Sbjct: 356  FEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLH 415

Query: 196  GEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTF 17
            G    A D +++M  +N+   + T++ +I GFC++G   +    L  +  K  +P   ++
Sbjct: 416  GRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSY 475

Query: 16   NEMIK 2
              +I+
Sbjct: 476  AHLIQ 480



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 57/239 (23%), Positives = 107/239 (44%)
 Frame = -3

Query: 1018 WKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIAR 839
            ++ +  + + G   D      LI  +C   +  +A +L  ++++ GF+P+   +  LI  
Sbjct: 317  FEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYG 376

Query: 838  FCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPH 659
            FCK+ +  +  +L   M+      T  +   +I GLC +    EA+  F  +  K     
Sbjct: 377  FCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCD 436

Query: 658  RVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWK 479
             + YNT+I G C   ++L + +L  E+ +KG  P+  +Y   +   C+ G    A ++W 
Sbjct: 437  VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWN 496

Query: 478  EMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCKI 302
            +M +RGL+      + +IS     G + E       M K  +K     +  +IQ   +I
Sbjct: 497  DMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQI 555



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 50/205 (24%), Positives = 86/205 (41%)
 Frame = -3

Query: 1015 KFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARF 836
            K + EM++ G   +  +   LI  +C      EA +L K++L+SG+    +    LI   
Sbjct: 353  KLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGL 412

Query: 835  CKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHR 656
            C      +  +    M  KN    + TY  +I G C      ++  +   L+ KG  P  
Sbjct: 413  CLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPST 472

Query: 655  VMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKE 476
              Y  +I  LC++  +  A+E+W +M ++G  P   T +  + G C+ G      +    
Sbjct: 473  SSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLIT 532

Query: 475  MSDRGLRKNKFNYNTMISSFSLGGK 401
            M    L+  K  +  +I S    GK
Sbjct: 533  MLKSNLKPQKETFYKLIQSLIQIGK 557



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 5/202 (2%)
 Frame = -3

Query: 1027 DVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKL 848
            D   K Y +M++ G      +   LI   C   +  EAY+  +++     V   I +  L
Sbjct: 384  DEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTL 443

Query: 847  IARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 668
            I  FC+     + ++LL  + AK   P+  +Y  +I  LC      EA  ++N +  +G 
Sbjct: 444  IQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGL 503

Query: 667  APHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSG-----QF 503
             P     + +I GLCE   ++   E    ML     P + T+   +    + G     + 
Sbjct: 504  QPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKELLLEL 563

Query: 502  DMAWKLWKEMSDRGLRKNKFNY 437
             M  K  KE+    + K+  N+
Sbjct: 564  KMDSKTSKEVYPLAMTKSSSNF 585



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 34/144 (23%), Positives = 63/144 (43%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFC 854
            R+D  + F+ EM    +  D  T   LI+ +C + K  ++ +LLK++   G  P    + 
Sbjct: 417  RTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYA 476

Query: 853  KLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEK 674
             LI + C++    +  E+ + M  +   P + T   II GLC      E       + + 
Sbjct: 477  HLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKS 536

Query: 673  GYAPHRVMYNTMIDGLCEMRQMLL 602
               P +  +  +I  L ++ + LL
Sbjct: 537  NLKPQKETFYKLIQSLIQIGKELL 560


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355519059|gb|AET00683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  333 bits (855), Expect = 3e-89
 Identities = 166/345 (48%), Positives = 229/345 (66%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGG--DADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIV 860
            R+D+VWK Y  M+E G+G   D +TVG LI+A+CA+NK F  YELL+QVLE G      V
Sbjct: 179  RTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTV 238

Query: 859  FCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALK 680
            F  LI  FCK + Y +VSE+LH+MIA  C P+I+TYQEII GL   +   EAFRVFN LK
Sbjct: 239  FNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLK 298

Query: 679  EKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFD 500
            ++GY P RVMY T+I G C+M  +  AR+LWFEM+ KG +PNE+TYNV ++G CK   F 
Sbjct: 299  DRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFA 358

Query: 499  MAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMI 320
             A KL+ +M  RG  +N  +Y+TMIS   L GK +EA +LF EM +  I RD ++YNS+I
Sbjct: 359  EARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLI 418

Query: 319  QGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVTGEMQAALDLWKDMLHRNVE 140
            +G C+  +  KA    ++L+  G +PS +++  LI+ LC  G+ + A+ L KDM  R++E
Sbjct: 419  KGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLE 478

Query: 139  PWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMI 5
            P  STHD +I+G  K+G+  +GM WL +ML    +P  +TF  +I
Sbjct: 479  PIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLI 523



 Score =  125 bits (314), Expect = 2e-26
 Identities = 77/308 (25%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
 Frame = -3

Query: 919  EAYELLKQVLESGFVPHGIVFCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIF--TYQE 746
            E +++   + + GF+P    F   +    KV     V +L  LMI       I   T   
Sbjct: 147  EVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGC 206

Query: 745  IIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKG 566
            +I   C        + +   + EKG      ++N +I+G C+ +Q     E+   M++  
Sbjct: 207  LIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMK 266

Query: 565  FIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEAC 386
              P+ +TY   ++G  K  + D A++++ ++ DRG   ++  Y T+I  F   G L EA 
Sbjct: 267  CNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEAR 326

Query: 385  ALFEEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRAL 206
             L+ EM +  +  +   YN MI G+CK+R   +A K Y ++   G   +  +Y ++I  L
Sbjct: 327  KLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGL 386

Query: 205  CVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLE 26
             + G+   AL L+ +M  + +   + +++++I G C++G   +  + L ++L +   P  
Sbjct: 387  YLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSV 446

Query: 25   KTFNEMIK 2
             +F  +IK
Sbjct: 447  SSFTPLIK 454



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 57/278 (20%), Positives = 108/278 (38%), Gaps = 35/278 (12%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFC 854
            ++D  ++ + ++ + G   D      +I+ +C      EA +L  ++++ G VP+   + 
Sbjct: 286  KNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYN 345

Query: 853  KLIARFCKVRDY--------------------------------GKVSE---LLHLMIAK 779
             +I  +CKVRD+                                GK  E   L H M  K
Sbjct: 346  VMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRK 405

Query: 778  NCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMLLA 599
              A  + +Y  +I GLC     A+A  + N L  +G  P    +  +I  LC++     A
Sbjct: 406  GIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGA 465

Query: 598  RELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMISS 419
              L  +M  +   P   T++  + G  K G F    +   +M    L+ N   +  +I  
Sbjct: 466  MRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDC 525

Query: 418  FSLGGKLNEACALFEEMPKMEIKRDAVNYNSMIQGFCK 305
                 +L++   + + M +   + +     S++  F K
Sbjct: 526  LKRENRLDDILIVLDLMFREGYRLEKSRICSLVTKFSK 563


>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950-like
            [Glycine max]
          Length = 577

 Score =  300 bits (769), Expect = 3e-79
 Identities = 158/345 (45%), Positives = 217/345 (62%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1033 RSDVVWKFYGEMMECGLGG--DADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIV 860
            R+D+VW  Y +MME G+    + +TVGYLI A+CA+ K  + YELLK++LE+G  P  +V
Sbjct: 192  RTDLVWTLYEQMMESGVVASINVETVGYLIMAFCAEYKVLKGYELLKELLENGLCPDNVV 251

Query: 859  FCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALK 680
            F +LI  FCK   Y +VSE+LH+MIAK C P + TYQEIIYGL   +  +E F+VFN LK
Sbjct: 252  FNELIRGFCKEGQYDRVSEILHIMIAKQCNPDVSTYQEIIYGLLKMK-NSEGFQVFNDLK 310

Query: 679  EKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKGFIPNEHTYNVFMHGCCKSGQFD 500
            ++GY P RVMY T+I GLCEM+++  AR+LWFEM+ KGF PNE+TYNV MHG CK G   
Sbjct: 311  DRGYFPDRVMYTTVIKGLCEMQRLGEARKLWFEMIKKGFQPNEYTYNVMMHGYCKIGDLA 370

Query: 499  MAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEACALFEEMPKMEIKRDAVNYNSMI 320
             A K++++M DRG  +   +Y TMIS   L G+ +EA +LFEEM +  I  D + YN +I
Sbjct: 371  EARKIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQSLFEEMFQKGIVPDLITYNCLI 430

Query: 319  QGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRALCVTGEMQAALDLWKDMLHRNVE 140
            +  CK  +  KA K  + L+A G + S  ++  LI+ LC+ G  + A+ LWKDM  R +E
Sbjct: 431  KALCKEVKIVKARKLLNLLLAQGLELSVFSFSPLIKQLCIVGNTKGAITLWKDMHDRLLE 490

Query: 139  PWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLEKTFNEMI 5
            P  S                 G+ WL  ML    +P ++TF  +I
Sbjct: 491  PTASIF---------------GIEWLLNMLSWKQKPQKQTFEYLI 520



 Score =  103 bits (256), Expect = 9e-20
 Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 2/308 (0%)
 Frame = -3

Query: 919  EAYELLKQVLESGFVPHGIVFCKLIARFCKVRDYGKVSELLHLMIAKNCAPTIF--TYQE 746
            +A ++LK+V+   F P    +   +    + R    V  L   M+      +I   T   
Sbjct: 163  DAVDMLKRVV---FCPSVATWNASLLGCLRARRTDLVWTLYEQMMESGVVASINVETVGY 219

Query: 745  IIYGLCNNQMGAEAFRVFNALKEKGYAPHRVMYNTMIDGLCEMRQMLLARELWFEMLSKG 566
            +I   C      + + +   L E G  P  V++N +I G C+  Q     E+   M++K 
Sbjct: 220  LIMAFCAEYKVLKGYELLKELLENGLCPDNVVFNELIRGFCKEGQYDRVSEILHIMIAKQ 279

Query: 565  FIPNEHTYNVFMHGCCKSGQFDMAWKLWKEMSDRGLRKNKFNYNTMISSFSLGGKLNEAC 386
              P+  TY   ++G  K    +  ++++ ++ DRG   ++  Y T+I       +L EA 
Sbjct: 280  CNPDVSTYQEIIYGLLKMKNSE-GFQVFNDLKDRGYFPDRVMYTTVIKGLCEMQRLGEAR 338

Query: 385  ALFEEMPKMEIKRDAVNYNSMIQGFCKIRQKKKAMKFYHELIATGSQPSAAAYHSLIRAL 206
             L+ EM K   + +   YN M+ G+CKI    +A K + ++   G   +  +Y ++I  L
Sbjct: 339  KLWFEMIKKGFQPNEYTYNVMMHGYCKIGDLAEARKIFEDMRDRGYAETTVSYGTMISGL 398

Query: 205  CVTGEMQAALDLWKDMLHRNVEPWISTHDNIIMGFCKQGNTREGMSWLTRMLEKNFRPLE 26
            C+ G    A  L+++M  + + P + T++ +I   CK+    +    L  +L +      
Sbjct: 399  CLHGRTDEAQSLFEEMFQKGIVPDLITYNCLIKALCKEVKIVKARKLLNLLLAQGLELSV 458

Query: 25   KTFNEMIK 2
             +F+ +IK
Sbjct: 459  FSFSPLIK 466