BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034551
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   168   5e-40
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   158   5e-37
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   149   2e-34
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   149   2e-34
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   144   7e-33

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  168 bits (425), Expect = 5e-40
 Identities = 85/113 (75%), Positives = 99/113 (87%)
 Frame = -2

Query: 358 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 179
           MP+NLT NAI  I  G++N KPLVQV+DIKLIG  NSQ+RYR LLSD+V+TQ AMLATQL
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIG--NSQERYRFLLSDAVATQQAMLATQL 58

Query: 178 NHRVKTGLVRKGSVIQLIDYICSTVQNRQIIVILNMETIIPDCEMIGNPKLES 20
           N RVK+G VRKGSVIQLIDYICS VQNR+IIV+LNMETIIP+CE+IGNPK+ +
Sbjct: 59  NDRVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNT 111


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = -2

Query: 358 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 179
           MP+NLT NAI+ I  G++N+KPLVQV+DIK IG  ++Q+RYR L+SDSVSTQ AMLATQL
Sbjct: 1   MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIG--SAQERYRFLISDSVSTQHAMLATQL 58

Query: 178 NHRVKTGLVRKGSVIQLIDYICSTVQNRQIIVILNMETIIPDCEMIGNPK 29
           N RVK G V+KGSV+QLIDYICS VQNR+IIV+LN+ETIIP+CE+IGN K
Sbjct: 59  NDRVKHGFVKKGSVVQLIDYICSEVQNRKIIVVLNLETIIPECEIIGNAK 108


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/117 (64%), Positives = 97/117 (82%)
 Frame = -2

Query: 358 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 179
           MP++LT NAI+ I  G++N KPLVQV+DIKLIG  N+Q+RY LL+SD+VS + AMLATQL
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG--NAQERYSLLISDAVSAEQAMLATQL 58

Query: 178 NHRVKTGLVRKGSVIQLIDYICSTVQNRQIIVILNMETIIPDCEMIGNPKLESGNGN 8
           N  VKTG V+KGSVIQLIDY+CS ++NR+IIV+L +ETII DCE+IGNPK  + + N
Sbjct: 59  NDVVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSEN 115


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/117 (64%), Positives = 97/117 (82%)
 Frame = -2

Query: 358 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 179
           MP++LT NAI+ I  G++N KPLVQV+DIKLIG  N+Q+RY LL+SD+VS + AMLATQL
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG--NAQERYSLLISDAVSAEQAMLATQL 58

Query: 178 NHRVKTGLVRKGSVIQLIDYICSTVQNRQIIVILNMETIIPDCEMIGNPKLESGNGN 8
           N  VKTG V+KGSVIQLIDY+CS ++NR+IIV+L +ETII DCE+IGNPK  + + N
Sbjct: 59  NDVVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSEN 115


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/113 (61%), Positives = 92/113 (81%), Gaps = 2/113 (1%)
 Frame = -2

Query: 358 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNN--SQDRYRLLLSDSVSTQSAMLAT 185
           MP++LT NAIT I  G++NLKPL+QV++IK+IG++   SQ+RYR L+SD VS Q AM+A 
Sbjct: 1   MPVSLTPNAITAINDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 184 QLNHRVKTGLVRKGSVIQLIDYICSTVQNRQIIVILNMETIIPDCEMIGNPKL 26
           QLN RVK+G V KGS++QLIDYICS V+ R++IV+LNMETI+P  E IGNP +
Sbjct: 61  QLNDRVKSGQVEKGSIVQLIDYICSDVKGRKLIVVLNMETIVPHSETIGNPTI 113