BLASTX nr result

ID: Coptis23_contig00034524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034524
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synth...   110   3e-22
emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]   110   3e-22
ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive tran...   106   4e-21
emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]   106   4e-21
gb|AFW98428.1| cis-prenyltransferase 4 [Solanum lycopersicum]         105   7e-21

>ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Vitis
           vinifera]
          Length = 311

 Score =  110 bits (275), Expect = 3e-22
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
 Frame = +2

Query: 395 FPSAILP---KPISAVISGIEELEHEQVGRSEELLPVSLERKFMPKHVAVIMDGNVRWAR 565
           FP   +P   K  +A    + E E  +V    E  P  L R+ MP+HVAVIMDGNVRWA+
Sbjct: 36  FPPISVPRFHKLRTAKTDVVGEEEAREVNERAEGFPDGLRRELMPEHVAVIMDGNVRWAQ 95

Query: 566 KNGLAFSLGHEAGVRALRNLIELSCRWGIKVLSVFAFSCDNWNR 697
           K GL  + GH+AGVR+LR L+ L C+WGIKVLSVFAFS DNW+R
Sbjct: 96  KRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSR 139


>emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]
          Length = 592

 Score =  110 bits (275), Expect = 3e-22
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
 Frame = +2

Query: 395 FPSAILP---KPISAVISGIEELEHEQVGRSEELLPVSLERKFMPKHVAVIMDGNVRWAR 565
           FP   +P   K  +A    + E E  +V    E  P  L R+ MP+HVAVIMDGNVRWA+
Sbjct: 42  FPPISVPRFHKLRTAKTDVVGEEEAREVNERAEGFPDGLRRELMPEHVAVIMDGNVRWAQ 101

Query: 566 KNGLAFSLGHEAGVRALRNLIELSCRWGIKVLSVFAFSCDNWNR 697
           K GL  + GH+AGVR+LR L+ L C+WGIKVLSVFAFS DNW+R
Sbjct: 102 KRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSR 145


>ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           BBM-like [Vitis vinifera]
          Length = 730

 Score =  106 bits (265), Expect = 4e-21
 Identities = 57/105 (54%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   SSEYSMLMGGSTNNHQHLDLEEPKLEDFLGGNSFSDHEQKLNGCNTM-TASYDNSGDYMF 178
           +SE SMLMG S ++H +L+ +EPKLE+FLG  SF+DHEQKL GCN++  A+YD+S DYMF
Sbjct: 98  TSELSMLMGSSCSSHHNLENQEPKLENFLGCRSFADHEQKLQGCNSIAAAAYDSSADYMF 157

Query: 179 SNCSLQLPXXXXXXXXXXXXXXXXXXXXXXXXIGLSMIKTWLRNQ 313
            NCSLQLP                        IGLSMIKTWLRNQ
Sbjct: 158 PNCSLQLP-SEPVDTPTPRGGGGGSTTVNNSSIGLSMIKTWLRNQ 201


>emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]
          Length = 731

 Score =  106 bits (265), Expect = 4e-21
 Identities = 57/105 (54%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   SSEYSMLMGGSTNNHQHLDLEEPKLEDFLGGNSFSDHEQKLNGCNTM-TASYDNSGDYMF 178
           +SE SMLMG S ++H +L+ +EPKLE+FLG  SF+DHEQKL GCN++  A+YD+S DYMF
Sbjct: 98  TSELSMLMGSSCSSHHNLENQEPKLENFLGCRSFADHEQKLQGCNSIAAAAYDSSADYMF 157

Query: 179 SNCSLQLPXXXXXXXXXXXXXXXXXXXXXXXXIGLSMIKTWLRNQ 313
            NCSLQLP                        IGLSMIKTWLRNQ
Sbjct: 158 PNCSLQLP-SEPVDTPTPRGGGGGSTTVNNSSIGLSMIKTWLRNQ 201


>gb|AFW98428.1| cis-prenyltransferase 4 [Solanum lycopersicum]
          Length = 308

 Score =  105 bits (263), Expect = 7e-21
 Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = +2

Query: 368 LISYKLLRVFPSAILPKP-ISAVISGIEELEHEQVGRSEEL-LPVSLERKFMPKHVAVIM 541
           LIS KL  + P A      +S + +G+  ++    G +EE+ LP  L R+ MPKHVA+IM
Sbjct: 28  LISLKLPSIHPLAFAQNAAVSNIDTGVAAID----GSAEEVSLPPQLRRELMPKHVALIM 83

Query: 542 DGNVRWARKNGLAFSLGHEAGVRALRNLIELSCRWGIKVLSVFAFSCDNWNRP 700
           DGN RWA+  GL  +LG+EAG+RA+R +IEL   WGI VL++FAFS DNW RP
Sbjct: 84  DGNRRWAKMRGLPVALGYEAGIRAVRKIIELCGNWGIMVLTLFAFSSDNWLRP 136


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