BLASTX nr result

ID: Coptis23_contig00034522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034522
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314147.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-13
ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera]         61   1e-12
emb|CBI24378.3| unnamed protein product [Vitis vinifera]               61   1e-12
emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera]    61   1e-12
ref|XP_002866313.1| subtilase family protein [Arabidopsis lyrata...    63   2e-12

>ref|XP_002314147.1| predicted protein [Populus trichocarpa] gi|222850555|gb|EEE88102.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score = 67.4 bits (163), Expect(2) = 1e-13
 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -3

Query: 355 IVSIFLSRTISLHKTRSSDFMGFEYRM-WKEWLREQRQVGVIDI*IWPEVESFNNEGFGP 179
           +VSIF S T+ L  TRS DFMGF      K        VGVID  IWPE ESFN++GFGP
Sbjct: 71  VVSIFPSTTLQLQTTRSWDFMGFNVTASGKRGTHSDIIVGVIDTGIWPESESFNDDGFGP 130

Query: 178 PPKNGRVA 155
           PP+  R A
Sbjct: 131 PPRKWRGA 138



 Score = 33.5 bits (75), Expect(2) = 1e-13
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -2

Query: 170 KWKGSCDGGKNITCN 126
           KW+G+C+GG+N TCN
Sbjct: 134 KWRGACEGGENFTCN 148


>ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 744

 Score = 60.8 bits (146), Expect(2) = 1e-12
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = -3

Query: 358 GIVSIFLSRTISLHKTRSSDFMGFEYRMWKE-WLREQRQVGVIDI*IWPEVESFNNEGFG 182
           G+VSIF +R + LH TRS DFMGF   + +   +     +GVID  IWPE++SF++EGF 
Sbjct: 105 GVVSIFPNRLLQLHTTRSWDFMGFSETVKRNPTVESDTIIGVIDSGIWPELQSFSDEGFS 164

Query: 181 PPPK 170
             PK
Sbjct: 165 SIPK 168



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 182 SSTEKWKGSCDGGKNITCNK 123
           S  +KWKG C GGKN TCNK
Sbjct: 165 SIPKKWKGVCQGGKNFTCNK 184


>emb|CBI24378.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score = 60.8 bits (146), Expect(2) = 1e-12
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = -3

Query: 358 GIVSIFLSRTISLHKTRSSDFMGFEYRMWKE-WLREQRQVGVIDI*IWPEVESFNNEGFG 182
           G+VSIF +R + LH TRS DFMGF   + +   +     +GVID  IWPE++SF++EGF 
Sbjct: 102 GVVSIFPNRLLQLHTTRSWDFMGFSETVKRNPTVESDTIIGVIDSGIWPELQSFSDEGFS 161

Query: 181 PPPK 170
             PK
Sbjct: 162 SIPK 165



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 182 SSTEKWKGSCDGGKNITCNK 123
           S  +KWKG C GGKN TCNK
Sbjct: 162 SIPKKWKGVCQGGKNFTCNK 181


>emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera]
          Length = 683

 Score = 60.8 bits (146), Expect(2) = 1e-12
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = -3

Query: 358 GIVSIFLSRTISLHKTRSSDFMGFEYRMWKE-WLREQRQVGVIDI*IWPEVESFNNEGFG 182
           G+VSIF +R + LH TRS DFMGF   + +   +     +GVID  IWPE++SF++EGF 
Sbjct: 101 GVVSIFPNRLLQLHTTRSWDFMGFSETVKRNPTVESDTIIGVIDSGIWPELQSFSDEGFS 160

Query: 181 PPPK 170
             PK
Sbjct: 161 SIPK 164



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -2

Query: 182 SSTEKWKGSCDGGKNITCNK 123
           S  +KWKG C GGKN TCNK
Sbjct: 161 SIPKKWKGVCQGGKNFTCNK 180


>ref|XP_002866313.1| subtilase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312148|gb|EFH42572.1| subtilase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 693

 Score = 63.2 bits (152), Expect(2) = 2e-12
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -3

Query: 355 IVSIFLSRTISLHKTRSSDFMGFEYRMWKEWLREQRQ-VGVIDI*IWPEVESFNNEGFGP 179
           +VS+F S++  L  TRS DF+GF  R   E ++E    VGVID  IWPE ESF+++GFGP
Sbjct: 61  VVSVFPSKSHELTTTRSWDFVGFGERAKGESVKESDVIVGVIDSGIWPESESFDDKGFGP 120

Query: 178 PPK 170
           PPK
Sbjct: 121 PPK 123



 Score = 33.9 bits (76), Expect(2) = 2e-12
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 173 EKWKGSCDGGKNITCN 126
           +KWKGSC GG N TCN
Sbjct: 123 KKWKGSCKGGLNFTCN 138


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