BLASTX nr result

ID: Coptis23_contig00034518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034518
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloro...   123   2e-26
gb|AFK45062.1| unknown [Lotus japonicus]                              121   5e-26
ref|XP_002334170.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002326159.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003625564.1| hypothetical protein MTR_7g100540 [Medicago ...   118   6e-25

>ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis
           vinifera] gi|297741495|emb|CBI32627.3| unnamed protein
           product [Vitis vinifera] gi|342160850|gb|AEL16461.1|
           type II peroxiredoxin 2 [Vitis vinifera]
          Length = 254

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/95 (64%), Positives = 74/95 (77%)
 Frame = -3

Query: 286 AKRNRITVLTASSNPLGNASTLISEDTQSLLNKVNVFNLNGNATVISDLWKDRKALVAFA 107
           + R  IT   AS +P G  S+ +S+DT +LL++  VF+LNGN   ISDLWKDRKA+VAFA
Sbjct: 48  SSRRVITASAASGSP-GIESSTVSDDTTNLLDRAQVFDLNGNGIPISDLWKDRKAVVAFA 106

Query: 106 RHFGCVLCRKRADYLASVKDKMDAAGVTLILIGPG 2
           RHFGCV CRKRAD LAS KD+MDA+GV L+LIGPG
Sbjct: 107 RHFGCVFCRKRADLLASQKDRMDASGVALVLIGPG 141


>gb|AFK45062.1| unknown [Lotus japonicus]
          Length = 256

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/92 (66%), Positives = 69/92 (75%)
 Frame = -3

Query: 277 NRITVLTASSNPLGNASTLISEDTQSLLNKVNVFNLNGNATVISDLWKDRKALVAFARHF 98
           NR    T  S   G  S ++SEDT   L+ V VF+LNGN   ISDLWKDRKA+VAFARHF
Sbjct: 52  NRHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHF 111

Query: 97  GCVLCRKRADYLASVKDKMDAAGVTLILIGPG 2
           GCVLCRKRADYLA+ KD MDA+GV L+LIGPG
Sbjct: 112 GCVLCRKRADYLAAKKDLMDASGVALVLIGPG 143


>ref|XP_002334170.1| predicted protein [Populus trichocarpa] gi|222869935|gb|EEF07066.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/76 (73%), Positives = 66/76 (86%)
 Frame = -3

Query: 229 STLISEDTQSLLNKVNVFNLNGNATVISDLWKDRKALVAFARHFGCVLCRKRADYLASVK 50
           S L+SEDT ++L+ V VF+LNGNA   SDLWKDRKA+VAFARHFGCVLCR+RADYLA+ K
Sbjct: 10  SGLVSEDTTNILDTVEVFDLNGNAIPFSDLWKDRKAVVAFARHFGCVLCRRRADYLAAKK 69

Query: 49  DKMDAAGVTLILIGPG 2
           D MDA+GV L+LIGPG
Sbjct: 70  DIMDASGVALVLIGPG 85


>ref|XP_002326159.1| predicted protein [Populus trichocarpa] gi|222833352|gb|EEE71829.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/76 (73%), Positives = 66/76 (86%)
 Frame = -3

Query: 229 STLISEDTQSLLNKVNVFNLNGNATVISDLWKDRKALVAFARHFGCVLCRKRADYLASVK 50
           S L+SEDT ++L+ V VF+LNGNA   SDLWKDRKA+VAFARHFGCVLCR+RADYLA+ K
Sbjct: 13  SGLVSEDTTNILDTVEVFDLNGNAIPFSDLWKDRKAVVAFARHFGCVLCRRRADYLAAKK 72

Query: 49  DKMDAAGVTLILIGPG 2
           D MDA+GV L+LIGPG
Sbjct: 73  DIMDASGVALVLIGPG 88


>ref|XP_003625564.1| hypothetical protein MTR_7g100540 [Medicago truncatula]
           gi|355500579|gb|AES81782.1| hypothetical protein
           MTR_7g100540 [Medicago truncatula]
          Length = 251

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/101 (59%), Positives = 70/101 (69%)
 Frame = -3

Query: 304 HSYTPFAKRNRITVLTASSNPLGNASTLISEDTQSLLNKVNVFNLNGNATVISDLWKDRK 125
           +S  P       T +  +S   G  S ++ +DT S L  V VF+L GN   ISDLWKDRK
Sbjct: 38  YSNNPLKLHPVSTTIPFASGSAGVKSPVLGDDTSSSLELVKVFDLEGNGIPISDLWKDRK 97

Query: 124 ALVAFARHFGCVLCRKRADYLASVKDKMDAAGVTLILIGPG 2
           A+VAFARHFGCVLCRKRADYLAS KD MDA+GV L+LIGPG
Sbjct: 98  AVVAFARHFGCVLCRKRADYLASKKDIMDASGVALVLIGPG 138


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