BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034508
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...   132   2e-29
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28

>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/91 (67%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   KQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSFNIILNGWCNMLVNL 180
           KQF F +GIEEFQ+LLSALCRYKNV+ AE  LFCN   +P +TKSFNIILNGWCN++ ++
Sbjct: 212 KQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWCNVIGSM 271

Query: 181 GQAKRFWRLMGKKGIVRDTVSFSSMISCYSK 273
            +A+RFWR M  +GI RD VS+SS+ISCYSK
Sbjct: 272 REAERFWREMSNRGIQRDVVSYSSIISCYSK 302


>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  135 bits (340), Expect = 3e-30
 Identities = 59/92 (64%), Positives = 74/92 (80%)
 Frame = +1

Query: 1   KQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSFNIILNGWCNMLVNL 180
           KQFNF++G+EEF  LLSALCRYKNV+ AEH LFCN+  +PL+TKSFNIILNGWCN++V+ 
Sbjct: 161 KQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIILNGWCNLIVST 220

Query: 181 GQAKRFWRLMGKKGIVRDTVSFSSMISCYSKA 276
             A+R W  M K+ I  D VS+ S+ISCYSK+
Sbjct: 221 SHAERIWHEMSKRRIQHDVVSYGSIISCYSKS 252


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  132 bits (333), Expect = 2e-29
 Identities = 58/92 (63%), Positives = 75/92 (81%)
 Frame = +1

Query: 1   KQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSFNIILNGWCNMLVNL 180
           K+FNF++G+ EFQ LLSALCRYKNV+ AEH LFCN+  +PL+TKSFNIILNGWCN++V+ 
Sbjct: 230 KRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSA 289

Query: 181 GQAKRFWRLMGKKGIVRDTVSFSSMISCYSKA 276
             A+R W  M K+ I  D VS++S+ISCYSK+
Sbjct: 290 RNAERIWEEMSKRRIQHDVVSYASIISCYSKS 321


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/92 (61%), Positives = 76/92 (82%)
 Frame = +1

Query: 1   KQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSFNIILNGWCNMLVNL 180
           K+F F++GIEEFQ LLSALCRYKNV+ AE  ++CN+  +PLNTKSFNI+LNGWCN++ + 
Sbjct: 154 KRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSP 213

Query: 181 GQAKRFWRLMGKKGIVRDTVSFSSMISCYSKA 276
            +++R WR M K+GI  D VS++SM+SCYSKA
Sbjct: 214 RESERVWREMSKRGIRFDVVSYASMMSCYSKA 245


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score =  129 bits (324), Expect = 2e-28
 Identities = 57/92 (61%), Positives = 73/92 (79%)
 Frame = +1

Query: 1   KQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSFNIILNGWCNMLVNL 180
           K+FNF +G+EEF  LLSALCRYKNV+ AE+ LFCN+  +PL+TKSFNIILNGWCN++V+ 
Sbjct: 257 KRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSFNIILNGWCNLIVST 316

Query: 181 GQAKRFWRLMGKKGIVRDTVSFSSMISCYSKA 276
             A+R W  M K+ I  D VS+ S+ISCYSK+
Sbjct: 317 SHAERIWHEMIKRRIQHDVVSYGSIISCYSKS 348