BLASTX nr result

ID: Coptis23_contig00034500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034500
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522190.1| PREDICTED: uncharacterized protein LOC100795...    60   2e-07
emb|CAN66404.1| hypothetical protein VITISV_026850 [Vitis vinifera]    60   2e-07
ref|XP_002891973.1| hypothetical protein ARALYDRAFT_314925 [Arab...    56   3e-06
emb|CAN76141.1| hypothetical protein VITISV_028763 [Vitis vinifera]    56   3e-06
emb|CAN73688.1| hypothetical protein VITISV_042244 [Vitis vinifera]    56   4e-06

>ref|XP_003522190.1| PREDICTED: uncharacterized protein LOC100795315 [Glycine max]
          Length = 374

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
 Frame = -1

Query: 540 EEGAPPSQGDFFVLSHTSRKTNDALDGQSREYIEKMKELAGRDENGNQQPLSD-----EI 376
           ++G  P++ + F+L+H  RK    LD +S + ++ ++E     E  N+Q L       ++
Sbjct: 253 KDGIEPTRAEVFILTHKERKDGRPLDAESIKTLDLIQEKLCNGETSNEQDLDSVAWEGDV 312

Query: 375 YRQVMPRERHGRVRLMGRGVTPTSYFGSQAS-------SHDTTSDRVAELENEMAEM 226
           Y QV+  ER G +R +G G TP+  +G + S       +++ +++ V +LE EM E+
Sbjct: 313 YSQVLGSERSGYIRGLGLGPTPSLLWGDKFSLGNISMNNNNMSNEMVPKLEQEMKEL 369


>emb|CAN66404.1| hypothetical protein VITISV_026850 [Vitis vinifera]
          Length = 437

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
 Frame = -1

Query: 543 REEGAPPSQGDFFVLSHTSRKTNDALDGQSREYIEKMKELAGRDENGNQQPLS------- 385
           +E+ + P++ + F L+HT RK    +D  S++ +++ K+L  + E  +    +       
Sbjct: 257 KEDRSEPNRIEMFALTHT-RKDGTPVDDHSKKIMDQFKQLLSQPEGTSSSTSASFGASTS 315

Query: 384 ------DEIYRQVMPRERHGRVRLMGRGVTPTSYFGSQASSHDTTSDRVAELENEMAEM 226
                 DEIY QVM  ERHGRV+  G G+TPTS FGS  S   + +    +LEN+   +
Sbjct: 316 VASTYVDEIYTQVMGPERHGRVQGYGFGLTPTSVFGS-TSRRRSGAILSTQLENDQERL 373


>ref|XP_002891973.1| hypothetical protein ARALYDRAFT_314925 [Arabidopsis lyrata subsp.
           lyrata] gi|297337815|gb|EFH68232.1| hypothetical protein
           ARALYDRAFT_314925 [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -1

Query: 489 SRKTNDALDGQSREYI-EKMKELAGRDENGNQQPLSDEIYRQVMPRERHGRVRLMGRGVT 313
           S +T +  + Q+ E + EK+ + AG     N  P S++ + QV  RER GRVR +G G T
Sbjct: 6   SDETQNGEENQTNEKLAEKITQNAGNTSGSNNTPNSNDDFAQVFGRERPGRVRCVGLGPT 65

Query: 312 PTSYFGSQASSHDTTSDRVAELENEMAEM 226
           P+S+F ++ ++  +    V  L N + E+
Sbjct: 66  PSSFFQNRTTTQSSEEQEVIGLRNRVREL 94


>emb|CAN76141.1| hypothetical protein VITISV_028763 [Vitis vinifera]
          Length = 877

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 23/107 (21%)
 Frame = -1

Query: 543  REEGAPPSQGDFFVLSHTSRKTNDALDGQSREYIEKMKELAGRDENGNQQPLS------- 385
            +E+ + P++ + F L+HT RK    +D  S+E +++ ++L  + E  +    +       
Sbjct: 740  KEDRSEPNRIEMFALTHT-RKDGTPVDDHSKEIMDQFQQLLSQPEGTSSSTSASSGASTF 798

Query: 384  ----------------DEIYRQVMPRERHGRVRLMGRGVTPTSYFGS 292
                            DEIY QVM  ERHGRVR  G G TPTS FGS
Sbjct: 799  VSSTSVASTSVASTYVDEIYTQVMGPERHGRVRGYGFGPTPTSIFGS 845


>emb|CAN73688.1| hypothetical protein VITISV_042244 [Vitis vinifera]
          Length = 674

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
 Frame = -1

Query: 543 REEGAPPSQGDFFVLSHTSRKTNDALDGQSREYIEKMKELAGRDE--------NGNQQPL 388
           +E+ + P++ + F L+H  RK    +D  S+E +++ ++L  + +        +      
Sbjct: 482 KEDRSEPNRIEMFALTH-KRKDGTPIDDHSKEIMDQFQQLLSQPDGTSFSTSASSGASTY 540

Query: 387 SDEIYRQVMPRERHGRVRLMGRGVTPTSYFGSQASSHDTTSDRVAELENEMAEMXXXXXX 208
            DEIY QVM  ERHG VR  G G TPT  FGS  S   + +    +LEN   EM      
Sbjct: 541 VDEIYTQVMGPERHGHVRGYGFGPTPTLVFGS-TSRRRSGAILSTQLENAQ-EMLIAAEQ 598

Query: 207 XXXXXXXXXXEIKRGFDARYEAMEARFMETLMQRTSLSRMLDEQDE 70
                      +K       E  E R +E  +QR +   + +E +E
Sbjct: 599 KFTTATEELSNVKYELSHVKETFEERLIE--VQRNTQEEVKEEFEE 642


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