BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034485
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU95322.1| PsbH, partial (chloroplast) [Linum usitatissimum]      113   1e-23
gb|AFM83384.1| photosystem II phosphoprotein (chloroplast) [Cora...   113   2e-23
gb|ABV65652.1| photosystem II phosphoprotein (chloroplast) [Stap...   113   2e-23
gb|ADD30660.1| photosystem II phosphoprotein [Meliosma aff. cune...   112   2e-23
ref|YP_740679.1| photosystem II phosphoprotein [Nandina domestic...   112   3e-23

>gb|AFU95322.1| PsbH, partial (chloroplast) [Linum usitatissimum]
          Length = 73

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/58 (94%), Positives = 58/58 (100%)
 Frame = -2

Query: 202 QTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLAIILEIYNSSVLLDGISMN 29
           +TGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL+IILEIYNSSVLLDGISMN
Sbjct: 16  RTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGISMN 73


>gb|AFM83384.1| photosystem II phosphoprotein (chloroplast) [Corallorhiza striata
           var. vreelandii]
          Length = 73

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = -2

Query: 211 GVTQTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLAIILEIYNSSVLLDGISM 32
           G  +TG GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL+IILEIYNSSVLLDGISM
Sbjct: 13  GPRRTGVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGISM 72

Query: 31  N 29
           N
Sbjct: 73  N 73


>gb|ABV65652.1| photosystem II phosphoprotein (chloroplast) [Staphylea colchica]
          Length = 73

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/58 (94%), Positives = 57/58 (98%)
 Frame = -2

Query: 202 QTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLAIILEIYNSSVLLDGISMN 29
           QTG GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL+IILEIYNSSVLLDGISMN
Sbjct: 16  QTGIGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGISMN 73


>gb|ADD30660.1| photosystem II phosphoprotein [Meliosma aff. cuneifolia Moore 333]
          Length = 73

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = -2

Query: 211 GVTQTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLAIILEIYNSSVLLDGISM 32
           G  QTG GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL+IILEIYNSSVLLDGISM
Sbjct: 13  GPRQTGVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGISM 72

Query: 31  N 29
           +
Sbjct: 73  S 73


>ref|YP_740679.1| photosystem II phosphoprotein [Nandina domestica]
           gi|114054500|gb|ABI49893.1| photosystem II
           phosphoprotein [Nandina domestica]
          Length = 75

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/58 (94%), Positives = 57/58 (98%)
 Frame = -2

Query: 202 QTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLAIILEIYNSSVLLDGISMN 29
           QTG G+LLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL+IILEIYNSSVLLDGISMN
Sbjct: 18  QTGLGNLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 75