BLASTX nr result

ID: Coptis23_contig00034466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034466
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|2...    46   2e-06
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...    46   2e-06
emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]    44   4e-06

>ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|222843391|gb|EEE80938.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = -2

Query: 344 DSIDFGHWTLLHVASADGLYLMTKLLIGAGVSGLLKDR 231
           +S D+ H T LHVA+++GLYLM KLLI AG S   KDR
Sbjct: 681 NSKDYDHRTPLHVAASEGLYLMAKLLIEAGASVFSKDR 718



 Score = 30.8 bits (68), Expect(2) = 2e-06
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 409 IDDAGSFLCAAVARGGC*FPKK 344
           IDDAGS LC AVARG   F K+
Sbjct: 651 IDDAGSVLCRAVARGDSDFLKR 672


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = -2

Query: 344 DSIDFGHWTLLHVASADGLYLMTKLLIGAGVSGLLKDR 231
           +S D+ H T LHVA+++GLYLM KLLI AG S   KDR
Sbjct: 669 NSKDYDHRTPLHVAASEGLYLMAKLLIEAGASVFSKDR 706



 Score = 30.8 bits (68), Expect(2) = 2e-06
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 409 IDDAGSFLCAAVARGGC*FPKK 344
           IDDAGS LC AVARG   F K+
Sbjct: 639 IDDAGSVLCRAVARGDSDFLKR 660


>emb|CAN64951.1| hypothetical protein VITISV_022830 [Vitis vinifera]
          Length = 559

 Score = 43.5 bits (101), Expect(2) = 4e-06
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = -2

Query: 344 DSIDFGHWTLLHVASADGLYLMTKLLIGAGVSGLLKDR 231
           +S D+ H T LHVA+++GLY M KLL+ AG S   KDR
Sbjct: 400 NSKDYDHRTPLHVAASEGLYFMAKLLLEAGASVFSKDR 437



 Score = 32.0 bits (71), Expect(2) = 4e-06
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -3

Query: 409 IDDAGSFLCAAVARGGC*FPKK 344
           IDDAG FLCA +ARG   F K+
Sbjct: 370 IDDAGGFLCATIARGDSDFLKR 391


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