BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034442
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]   137   7e-31
ref|XP_003629742.1| Pentatricopeptide repeat-containing protein ...   137   1e-30

>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/95 (72%), Positives = 84/95 (88%)
 Frame = +3

Query: 3   RIHGNPAIAEVAANHLFDLEPNSIGNYIVLSNIFAVAGMWTDVSRVRKLMREKGLRKNPG 182
           RIHGNP +A++AA+HLF+LEPN IGNYI+LSNI+A AG W DVS+VRKLMR KGL+KNPG
Sbjct: 454 RIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPG 513

Query: 183 CSLMEAKDGIIHELFDGDITHPKSKEIKEALEELL 287
           CS +E K GIIHE F GD++HPKS+EIK+ALE+LL
Sbjct: 514 CSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLL 548


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/96 (63%), Positives = 80/96 (83%)
 Frame = +3

Query: 3   RIHGNPAIAEVAANHLFDLEPNSIGNYIVLSNIFAVAGMWTDVSRVRKLMREKGLRKNPG 182
           RIHGNP IA++AAN LF LEPN IGNYI+LSNI+A AG W +VS++RK++REKG +KNPG
Sbjct: 457 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 516

Query: 183 CSLMEAKDGIIHELFDGDITHPKSKEIKEALEELLQ 290
           CS  E K+G IH+ F GD THP+S EI++AL++L++
Sbjct: 517 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIE 552


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/96 (63%), Positives = 80/96 (83%)
 Frame = +3

Query: 3   RIHGNPAIAEVAANHLFDLEPNSIGNYIVLSNIFAVAGMWTDVSRVRKLMREKGLRKNPG 182
           RIHGNP IA++AAN LF LEPN IGNYI+LSNI+A AG W +VS++RK++REKG +KNPG
Sbjct: 457 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 516

Query: 183 CSLMEAKDGIIHELFDGDITHPKSKEIKEALEELLQ 290
           CS  E K+G IH+ F GD THP+S EI++AL++L++
Sbjct: 517 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIE 552


>emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]
          Length = 228

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/88 (71%), Positives = 78/88 (88%)
 Frame = +3

Query: 24  IAEVAANHLFDLEPNSIGNYIVLSNIFAVAGMWTDVSRVRKLMREKGLRKNPGCSLMEAK 203
           +A++AA+HLF+LEPN IGNYI+LSNI+A AG W DVS+VRKLMR KGL+KNPGCS +E K
Sbjct: 1   MAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGK 60

Query: 204 DGIIHELFDGDITHPKSKEIKEALEELL 287
            GIIHE F GD++HPKS+EIK+ALE+LL
Sbjct: 61  KGIIHEFFAGDMSHPKSREIKQALEDLL 88


>ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523764|gb|AET04218.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  137 bits (344), Expect = 1e-30
 Identities = 62/95 (65%), Positives = 80/95 (84%)
 Frame = +3

Query: 6   IHGNPAIAEVAANHLFDLEPNSIGNYIVLSNIFAVAGMWTDVSRVRKLMREKGLRKNPGC 185
           IHGNP +AE+A+  LF+LEP+++GNY++LS  +A+A  W DVSRVRKLMREK LRKNPGC
Sbjct: 424 IHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGC 483

Query: 186 SLMEAKDGIIHELFDGDITHPKSKEIKEALEELLQ 290
           S +EAK+GIIHE F GD+ HP+  EIK+AL++LLQ
Sbjct: 484 SWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQ 518