BLASTX nr result

ID: Coptis23_contig00034438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034438
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267603.1| PREDICTED: uncharacterized protein LOC100247...    91   1e-16
ref|XP_003562177.1| PREDICTED: uncharacterized protein LOC100843...    87   1e-15
ref|XP_002327566.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
gb|EEE58228.1| hypothetical protein OsJ_09201 [Oryza sativa Japo...    84   9e-15
gb|EEC74406.1| hypothetical protein OsI_09764 [Oryza sativa Indi...    84   9e-15

>ref|XP_002267603.1| PREDICTED: uncharacterized protein LOC100247879 [Vitis vinifera]
           gi|297738139|emb|CBI27340.3| unnamed protein product
           [Vitis vinifera]
          Length = 407

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
 Frame = -1

Query: 234 DWLDGGISQPQLVLADLIEAFFPTGN*N---FRNLAKEEGVVSIDPQKCDRDSSTAMQPT 64
           DW DG ISQPQLVLADL+EA FPTG+      RNLAKEEGV++I  + CDRDSSTAM+PT
Sbjct: 342 DWFDGAISQPQLVLADLVEALFPTGSYTTTYLRNLAKEEGVINIKSEMCDRDSSTAMEPT 401

Query: 63  KIDCQ 49
            + CQ
Sbjct: 402 ILACQ 406


>ref|XP_003562177.1| PREDICTED: uncharacterized protein LOC100843630 [Brachypodium
           distachyon]
          Length = 415

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/65 (66%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
 Frame = -1

Query: 234 DWLDGGISQPQLVLADLIEAFFPTGN*N---FRNLAKEEGVVSIDPQKCDRDSSTAMQPT 64
           DW DG ISQPQLVLADL+E FFPTGN     FRNLAKEEGV  I P+ C R  ST M+PT
Sbjct: 351 DWFDGAISQPQLVLADLVEVFFPTGNYTTVYFRNLAKEEGVTEIGPEICGRSISTPMEPT 410

Query: 63  KIDCQ 49
            + CQ
Sbjct: 411 ILPCQ 415


>ref|XP_002327566.1| predicted protein [Populus trichocarpa] gi|222836120|gb|EEE74541.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
 Frame = -1

Query: 291 NTCATFVIDLPM------VMTINFEDWLDGGISQPQLVLADLIEAFFPTGN*N---FRNL 139
           N+C  F+ +  +      V  +   DW DG +SQPQLVLADLIE  FP GN +   FRN+
Sbjct: 291 NSCFAFIANQSLWRYDKRVQNLTTLDWNDGAVSQPQLVLADLIEVLFPDGNYSTTYFRNI 350

Query: 138 AKEEGVVSIDPQKCDRDSSTAMQPTKIDC 52
           AK EGVVSID   C+RD ST ++PT + C
Sbjct: 351 AKGEGVVSIDANMCERDISTPLEPTILSC 379


>gb|EEE58228.1| hypothetical protein OsJ_09201 [Oryza sativa Japonica Group]
          Length = 416

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/65 (63%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
 Frame = -1

Query: 234 DWLDGGISQPQLVLADLIEAFFPTGN*N---FRNLAKEEGVVSIDPQKCDRDSSTAMQPT 64
           DW DG ISQPQLVLADLIE FFPTGN     FRNL K+EGV  + P+ C R  ST M+PT
Sbjct: 352 DWFDGAISQPQLVLADLIEIFFPTGNYTTIYFRNLMKDEGVTEVVPEMCSRSISTPMEPT 411

Query: 63  KIDCQ 49
            + CQ
Sbjct: 412 ILPCQ 416


>gb|EEC74406.1| hypothetical protein OsI_09764 [Oryza sativa Indica Group]
          Length = 416

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/65 (63%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
 Frame = -1

Query: 234 DWLDGGISQPQLVLADLIEAFFPTGN*N---FRNLAKEEGVVSIDPQKCDRDSSTAMQPT 64
           DW DG ISQPQLVLADLIE FFPTGN     FRNL K+EGV  + P+ C R  ST M+PT
Sbjct: 352 DWFDGAISQPQLVLADLIEIFFPTGNYTTIYFRNLMKDEGVTEVVPEMCSRSISTPMEPT 411

Query: 63  KIDCQ 49
            + CQ
Sbjct: 412 ILPCQ 416


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