BLASTX nr result

ID: Coptis23_contig00034435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034435
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   240   1e-61
emb|CBI27422.3| unnamed protein product [Vitis vinifera]              240   1e-61
ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-56
ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   219   1e-55
ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   219   1e-55

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
            [Vitis vinifera]
          Length = 1614

 Score =  240 bits (612), Expect = 1e-61
 Identities = 119/171 (69%), Positives = 140/171 (81%)
 Frame = +2

Query: 2    LSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQPDVIIQIGSRITSKRISQML 181
            LSGLRL+K+ T+F +  + +LF+DHLDHALL+D V+VWAQ DVIIQIGSRITSKRISQM+
Sbjct: 513  LSGLRLRKLSTSFQEIEDNVLFLDHLDHALLSDFVRVWAQADVIIQIGSRITSKRISQMI 572

Query: 182  EVCSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNM 361
            E C PC+YIMVDKHP RHDPSH++THRIQSTI +FAD L K Q P +S KWS  ++AL+M
Sbjct: 573  EDCFPCSYIMVDKHPCRHDPSHLLTHRIQSTITQFADCLCKAQFPLMSSKWSVSLRALDM 632

Query: 362  MVAREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGR 514
            MVA+EI   IHSE  LTEP+VA VI EAL  D+ALF GNSM IRDADMY R
Sbjct: 633  MVAQEISSLIHSESFLTEPYVAHVILEALTCDSALFIGNSMAIRDADMYAR 683


>emb|CBI27422.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  240 bits (612), Expect = 1e-61
 Identities = 119/171 (69%), Positives = 140/171 (81%)
 Frame = +2

Query: 2   LSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQPDVIIQIGSRITSKRISQML 181
           LSGLRL+K+ T+F +  + +LF+DHLDHALL+D V+VWAQ DVIIQIGSRITSKRISQM+
Sbjct: 327 LSGLRLRKLSTSFQEIEDNVLFLDHLDHALLSDFVRVWAQADVIIQIGSRITSKRISQMI 386

Query: 182 EVCSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNM 361
           E C PC+YIMVDKHP RHDPSH++THRIQSTI +FAD L K Q P +S KWS  ++AL+M
Sbjct: 387 EDCFPCSYIMVDKHPCRHDPSHLLTHRIQSTITQFADCLCKAQFPLMSSKWSVSLRALDM 446

Query: 362 MVAREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGR 514
           MVA+EI   IHSE  LTEP+VA VI EAL  D+ALF GNSM IRDADMY R
Sbjct: 447 MVAQEISSLIHSESFLTEPYVAHVILEALTCDSALFIGNSMAIRDADMYAR 497


>ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|222863947|gb|EEF01078.1|
            predicted protein [Populus trichocarpa]
          Length = 848

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/170 (62%), Positives = 134/170 (78%)
 Frame = +2

Query: 2    LSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQPDVIIQIGSRITSKRISQML 181
            LSGLRL+K+  + P+  E +LF+DHLDHALL++ V+ W + DVI+QIGSRITSKR+SQM+
Sbjct: 552  LSGLRLRKLLPSLPEIEENVLFVDHLDHALLSEWVRGWIRFDVIVQIGSRITSKRVSQMM 611

Query: 182  EVCSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNM 361
            E C PCTYI+VD HP RHDPSH VTHR+Q +I +FAD L K Q    + KW   ++ LN 
Sbjct: 612  EECFPCTYILVDNHPCRHDPSHFVTHRVQCSIRQFADSLMKAQFSHRNSKWCCFLRVLNT 671

Query: 362  MVAREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYG 511
            MVA +I FQI++E SLTEPHVA VI+EAL +++ALF GNSMVIRDADMYG
Sbjct: 672  MVAWDISFQINAENSLTEPHVAHVITEALSAESALFVGNSMVIRDADMYG 721


>ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  219 bits (559), Expect = 1e-55
 Identities = 110/172 (63%), Positives = 130/172 (75%)
 Frame = +2

Query: 2    LSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQPDVIIQIGSRITSKRISQML 181
            LSGLRL+K  + F +      FIDHLDHALL+DSV+ W + DVIIQIGSR+TSKR+S++L
Sbjct: 683  LSGLRLRKSLSPFLEMKNNFFFIDHLDHALLSDSVRKWLKFDVIIQIGSRVTSKRVSKLL 742

Query: 182  EVCSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNM 361
            E CSPC+YIMVDKHP RHDPSHIVTHRIQST++EF   L K   P    K +  ++ALNM
Sbjct: 743  EDCSPCSYIMVDKHPDRHDPSHIVTHRIQSTVLEFVGCLLKASFPLNKSKLTATLRALNM 802

Query: 362  MVAREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRG 517
            MV  EI+FQI + YSL+EP VAQVISEAL  D+ LF GNSM IRD DMY  G
Sbjct: 803  MVEWEIQFQISAHYSLSEPEVAQVISEALSFDSVLFLGNSMPIRDVDMYAYG 854


>ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  219 bits (559), Expect = 1e-55
 Identities = 110/172 (63%), Positives = 130/172 (75%)
 Frame = +2

Query: 2    LSGLRLKKVFTAFPQFTEKMLFIDHLDHALLADSVKVWAQPDVIIQIGSRITSKRISQML 181
            LSGLRL+K  + F +      FIDHLDHALL+DSV+ W + DVIIQIGSR+TSKR+S++L
Sbjct: 683  LSGLRLRKSLSPFLEMKNNFFFIDHLDHALLSDSVRKWLKFDVIIQIGSRVTSKRVSKLL 742

Query: 182  EVCSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNM 361
            E CSPC+YIMVDKHP RHDPSHIVTHRIQST++EF   L K   P    K +  ++ALNM
Sbjct: 743  EDCSPCSYIMVDKHPDRHDPSHIVTHRIQSTVLEFVGCLLKASFPLNKSKLTATLRALNM 802

Query: 362  MVAREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRG 517
            MV  EI+FQI + YSL+EP VAQVISEAL  D+ LF GNSM IRD DMY  G
Sbjct: 803  MVEWEIQFQISAHYSLSEPEVAQVISEALSFDSVLFLGNSMPIRDVDMYAYG 854


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