BLASTX nr result

ID: Coptis23_contig00034422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034422
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = -2

Query: 319 ILEDGHWQIPQRFKTYCPELVQGIEEEVKIHSGE-DEVVWTVTERGEYQMTATYGSIRQV 143
           ++++  W+ P         +++ I        G+ DE+VW  +    + +   +  +R+ 
Sbjct: 277 LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRH 336

Query: 142 RQSSMGHNIIWFRNRIPRFSFIAWLALRKGMKTLQKL 32
           RQ    H+I+WF+N +PR SF+ W+A+++ + T  KL
Sbjct: 337 RQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 373


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = -2

Query: 319  ILEDGHWQIPQRFKTYCPELVQGIEEEVKIHSGE-DEVVWTVTERGEYQMTATYGSIRQV 143
            ++++  W+ P         +++ I        G+ DE+VW  +    + +   +  +R+ 
Sbjct: 1150 LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRH 1209

Query: 142  RQSSMGHNIIWFRNRIPRFSFIAWLALRKGMKTLQKL 32
            RQ    H+I+WF+N +PR SF+ W+A+++ + T  KL
Sbjct: 1210 RQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 1246


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
 Frame = -2

Query: 319  ILEDGHWQIPQRFKTYCPELVQGIEEEVKIHSGE-DEVVWTVTERGEYQMTATYGSIRQV 143
            ++++  W+ P         +++ I        G+ DE++W  +    + +   +  +R+ 
Sbjct: 810  LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRH 869

Query: 142  RQSSMGHNIIWFRNRIPRFSFIAWLALRKGMKTLQKL 32
            RQ    H+I+WF+N +PR SF+ W+ +++ + T  KL
Sbjct: 870  RQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 906


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = -2

Query: 319 ILEDGHWQIPQRFKTYCPELVQGIEEEVKIHSGE-DEVVWTVTERGEYQMTATYGSIRQV 143
           ++++  W+ P         +++ I        G+ DE+VW  +    + +   +  +R+ 
Sbjct: 95  LIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRH 154

Query: 142 RQSSMGHNIIWFRNRIPRFSFIAWLALRKGMKTLQKL 32
           R     H+I+WF+N +PR SF+ W+ +++ + T  KL
Sbjct: 155 RHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 191


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