BLASTX nr result

ID: Coptis23_contig00034419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034419
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis...    58   7e-07
emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]    57   1e-06
ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis...    55   8e-06

>ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
           gi|297735488|emb|CBI17928.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/58 (58%), Positives = 38/58 (65%)
 Frame = +2

Query: 173 MASNPSEGGLTDDFLDQILSIPSYSVNDTNLAGNDGTTSASMVLQLSSSTAAGDGSYH 346
           MASNPSE    DDFL+QIL IP+Y   D NLA ND   +A MVLQL S    G+GS H
Sbjct: 1   MASNPSEAP-ADDFLEQILGIPTYPAADPNLAANDVNLAAPMVLQLGS----GEGSGH 53


>emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
          Length = 337

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = +2

Query: 173 MASNPSEGGLTDDFLDQILSIPSYSVNDTNLAGNDGTTSASMVLQLSSSTAAGDGSYH 346
           MA+NP+EG  TDDFL+QIL+IPSY  +D N+ G    T ++MVLQLSS    GDGS H
Sbjct: 1   MATNPAEG-YTDDFLEQILAIPSYPGHDPNMVG----TGSTMVLQLSS----GDGSGH 49


>ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
           gi|297737150|emb|CBI26351.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = +2

Query: 173 MASNPSEGGLTDDFLDQILSIPSYSVNDTNLAGNDGTTSASMVLQLSSSTAAGDGSYH 346
           MA+NP EG   DDFL+QIL+IPSY  +D N+ G    T ++MVLQLSS    GDGS H
Sbjct: 1   MATNPPEG-YADDFLEQILAIPSYPGHDPNMVG----TGSTMVLQLSS----GDGSGH 49


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