BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034412
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
emb|CBI16890.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]   157   6e-37

>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/140 (57%), Positives = 103/140 (73%), Gaps = 2/140 (1%)
 Frame = -2

Query: 416 ATMNRILLTLASFDAS--LSWNFFTWAADCIPHYKLTLQPSWTMLHVLTYHKKFTFAQTL 243
           AT+ ++LL L+ +D S  LSW  F W    +P+YK +LQ SWTML++LT HK F  A   
Sbjct: 47  ATVRQVLLHLSLYDQSPCLSWALFKWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAF 106

Query: 242 LQNIAFKDFLSSPSVLNSLITTHSDPRLNSQILSWLLIIYAKSKMTQDAIQVFDQMRVHR 63
           L+NIAFKDFLS+ SVL+SL+  H DP +NS +LSWL+I+Y  SKMT +AIQVF+ MRV+ 
Sbjct: 107 LENIAFKDFLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNG 166

Query: 62  LTPHLPACSVLLNALVKDRL 3
             PHL AC+VLLN+L KDRL
Sbjct: 167 FRPHLHACTVLLNSLAKDRL 186


>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  164 bits (415), Expect = 7e-39
 Identities = 82/144 (56%), Positives = 110/144 (76%), Gaps = 2/144 (1%)
 Frame = -2

Query: 434 SALLVPATMNRILLTLASFDASLSWNF--FTWAADCIPHYKLTLQPSWTMLHVLTYHKKF 261
           ++ L  +T++++LL L+ +   LS +F  F W  D IPHY  +LQ SW M+H+LT HK F
Sbjct: 32  ASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWL-DSIPHYSHSLQCSWAMIHILTEHKHF 90

Query: 260 TFAQTLLQNIAFKDFLSSPSVLNSLITTHSDPRLNSQILSWLLIIYAKSKMTQDAIQVFD 81
             AQ +L+ IA KDFLSSPSVL++L+ TH +  +NSQ+LSWL+I YAKSKMTQDAIQVF+
Sbjct: 91  KTAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFE 150

Query: 80  QMRVHRLTPHLPACSVLLNALVKD 9
           QMR+H + PHL AC+VLLN+L+KD
Sbjct: 151 QMRLHEVKPHLHACTVLLNSLLKD 174


>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/141 (56%), Positives = 99/141 (70%)
 Frame = -2

Query: 425 LVPATMNRILLTLASFDASLSWNFFTWAADCIPHYKLTLQPSWTMLHVLTYHKKFTFAQT 246
           L    +N++LL L+     +SW FF W    + H K +LQ SWTM+H L  HK+F  AQ 
Sbjct: 63  LTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNH-KHSLQSSWTMIHTLAKHKQFKTAQN 121

Query: 245 LLQNIAFKDFLSSPSVLNSLITTHSDPRLNSQILSWLLIIYAKSKMTQDAIQVFDQMRVH 66
           LL+ IA +D+LSSPSVLN+++  H DP  NSQILSWL+I YA S+MTQDAIQVF+ MRVH
Sbjct: 122 LLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVH 181

Query: 65  RLTPHLPACSVLLNALVKDRL 3
              PHL AC+VLLN+L K RL
Sbjct: 182 GFKPHLHACTVLLNSLAKARL 202


>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/141 (56%), Positives = 99/141 (70%)
 Frame = -2

Query: 425 LVPATMNRILLTLASFDASLSWNFFTWAADCIPHYKLTLQPSWTMLHVLTYHKKFTFAQT 246
           L    +N++LL L+     +SW FF W    + H K +LQ SWTM+H L  HK+F  AQ 
Sbjct: 38  LTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNH-KHSLQSSWTMIHTLAKHKQFKTAQN 96

Query: 245 LLQNIAFKDFLSSPSVLNSLITTHSDPRLNSQILSWLLIIYAKSKMTQDAIQVFDQMRVH 66
           LL+ IA +D+LSSPSVLN+++  H DP  NSQILSWL+I YA S+MTQDAIQVF+ MRVH
Sbjct: 97  LLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVH 156

Query: 65  RLTPHLPACSVLLNALVKDRL 3
              PHL AC+VLLN+L K RL
Sbjct: 157 GFKPHLHACTVLLNSLAKARL 177


>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  157 bits (398), Expect = 6e-37
 Identities = 78/141 (55%), Positives = 98/141 (69%)
 Frame = -2

Query: 425 LVPATMNRILLTLASFDASLSWNFFTWAADCIPHYKLTLQPSWTMLHVLTYHKKFTFAQT 246
           L    +N++LL L+     +SW FF W    + H   +LQ SWTM+H L  HK+F  AQ 
Sbjct: 38  LTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXH-SLQSSWTMIHTLAKHKQFKTAQN 96

Query: 245 LLQNIAFKDFLSSPSVLNSLITTHSDPRLNSQILSWLLIIYAKSKMTQDAIQVFDQMRVH 66
           LL+ IA +D+LSSPSVLN+++  H DP  NSQILSWL+I YA S+MTQDAIQVF+ MRVH
Sbjct: 97  LLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVH 156

Query: 65  RLTPHLPACSVLLNALVKDRL 3
              PHL AC+VLLN+L K RL
Sbjct: 157 GFKPHLHACTVLLNSLAKARL 177